RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 DNASE2O00115 360 aaPredicted RBP4.4□□□□□ -1.7
TTC39C-201ENST00000304621 PDE6DO43924 150 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.7
TTC39C-201ENST00000304621 CRLF1O75462 422 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SCGB2A1O75556 95 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 S100A6P06703 90 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 HLA-DMBP28068 263 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.7
TTC39C-201ENST00000304621 KRTAP10-3P60369 221 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SCGB2A2Q13296 93 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SIGLEC15Q6ZMC9 328 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SVBPQ8N300 66 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 STXBP6Q8NFX7 210 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 UBE2E2Q96LR5 201 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.7
TTC39C-201ENST00000304621 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 ZNF320A2RRD8 509 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 M0R036 132 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 CD33P20138 364 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 MEOX2P50222 304 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 SLURP1P55000 103 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 RPL23P62829 140 aaKnown RBP4.4□□□□□ -1.71
TTC39C-201ENST00000304621 FLI1Q01543 452 aaPredicted RBP4.4□□□□□ -1.71
TTC39C-201ENST00000304621 TMEM88Q6PEY1 159 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 CBLN2Q8IUK8 224 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 GLMPQ8WWB7 406 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 METTL26Q96S19 204 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 ASCL2Q99929 193 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 RPH3ALQ9UNE2 315 aa4.4□□□□□ -1.71
TTC39C-201ENST00000304621 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 M0R3E3 92 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 PEX7O00628 323 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 SNAPINO95295 136 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 SLC25A5P05141 298 aaKnown RBP4.39□□□□□ -1.71
TTC39C-201ENST00000304621 CRYBA1P05813 215 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 HOXD3P31249 432 aaPredicted RBP4.39□□□□□ -1.71
TTC39C-201ENST00000304621 ADAMTSL5Q6ZMM2 481 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 GPHB5Q86YW7 130 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 OR8I2Q8N0Y5 310 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 TVP23CQ96ET8 276 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 SGK494Q96LW2 274 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 TXNDC17Q9BRA2 123 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 HIVEP1P15822 2718 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 TRAV8-2A0A0B4J237 113 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 IGHV7-4-1A0A0J9YVY3 117 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 A0A1W2PRX2 142 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 TMEM213A2RRL7 107 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 K7EN84 100 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 NDUFA7O95182 113 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 IGLV2-8P01709 118 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 CDX1P47902 265 aaPredicted RBP4.39□□□□□ -1.71
TTC39C-201ENST00000304621 SYNJ2BPP57105 145 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 TMEM241Q24JQ0 296 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 KHDC1LQ5JSQ8 128 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 C8orf86Q6ZUL3 223 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 C4orf3Q8WVX3 66 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 CITED2Q99967 270 aaPredicted RBP4.39□□□□□ -1.71
TTC39C-201ENST00000304621 NIPSNAP3BQ9BS92 247 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 NAT8Q9UHE5 227 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 EPDR1Q9UM22 224 aa4.39□□□□□ -1.71
TTC39C-201ENST00000304621 A0A087X0K7 114 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ADARB2-AS1A8MUL3 147 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ISLRO14498 428 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 CHEK1O14757 476 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 RPL7P18124 248 aaKnown RBP4.38□□□□□ -1.71
TTC39C-201ENST00000304621 PROK1P58294 105 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ADIRFQ15847 76 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ZNF124Q15973 351 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 RPEL1Q2QD12 228 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 CENPWQ5EE01 88 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 RNF182Q8N6D2 247 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 NHLRC2Q8NBF2 726 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 KLHL30-AS1Q8NEE0 82 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 OCC1Q8TAD7 63 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 GSN-AS1Q9NRJ2 163 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 SMPXQ9UHP9 88 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 FN1P02751 2386 aaKnown RBP4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 TCF21O43680 179 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 TCRAP04437 139 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 OR5I1Q13606 314 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 KLF5Q13887 457 aaPredicted RBP4.38□□□□□ -1.71
TTC39C-201ENST00000304621 ODF1Q14990 250 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 C1orf194Q5T5A4 169 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 REC114Q7Z4M0 266 aa4.38□□□□□ -1.71
TTC39C-201ENST00000304621 C5orf17Q8NAS9 161 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms