RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NDUFA3O95167 84 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 FER1L6-AS2Q96M78 137 aa11.53□□□□□ -0.56
CDT1-201ENST00000301019 M0R3E3 92 aa11.52□□□□□ -0.56
CDT1-201ENST00000301019 Q8IYB0 196 aa11.52□□□□□ -0.56
CDT1-201ENST00000301019 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.56
CDT1-201ENST00000301019 SPTA1P02549 2419 aa11.52□□□□□ -0.56
CDT1-201ENST00000301019 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 A0A1B0GW15 77 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 C15orf65H3BRN8 121 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 NDUFS7O75251 213 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 SPTBN1Q01082 2364 aaKnown RBP11.52□□□□□ -0.57
CDT1-201ENST00000301019 SIVA1O15304 175 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 SAA1P0DJI8 122 aaPredicted RBP11.52□□□□□ -0.57
CDT1-201ENST00000301019 PRTN3P24158 256 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 CKS2P33552 79 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 LYZP61626 148 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 CD69Q07108 199 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 DEFB127Q9H1M4 99 aa11.52□□□□□ -0.57
CDT1-201ENST00000301019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.51□□□□□ -0.57
CDT1-201ENST00000301019 NPYP01303 97 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 F8W1H4 67 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 TCRAP04437 139 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
CDT1-201ENST00000301019 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 CDIP1Q9H305 208 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
CDT1-201ENST00000301019 TMEM189A5PLL7 270 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 C12orf74Q32Q52 190 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 C11orf53Q8IXP5 236 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 C1QTNF4Q9BXJ3 329 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 C8orf49Q96NF6 230 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 LEPP41159 167 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 TCTEX1D4Q5JR98 221 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 Q6ZUT4 128 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 OR5AN1Q8NGI8 311 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 IMMP1LQ96LU5 166 aa11.5□□□□□ -0.57
CDT1-201ENST00000301019 HBDP02042 147 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 DLX1P56177 255 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 Q0VFX4 171 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 FOXI1Q12951 378 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 IGFL4Q6B9Z1 124 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 CEND1Q8N111 149 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 GCSAMQ8N6F7 178 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
CDT1-201ENST00000301019 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 CYB561P49447 251 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 TWIST1Q15672 202 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 PLA2G2CQ5R387 149 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 HARBI1Q96MB7 349 aa11.49□□□□□ -0.57
CDT1-201ENST00000301019 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 CNEP1R1Q8N9A8 125 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
CDT1-201ENST00000301019 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 ASH1LQ9NR48 2969 aaKnown RBP11.48□□□□□ -0.57
CDT1-201ENST00000301019 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 TRGV8A0A0C4DH27 118 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 H7C2G1 150 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 ZNF883P0CG24 379 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 WDR31Q8NA23 367 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 RIGQ13278 110 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
CDT1-201ENST00000301019 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
CDT1-201ENST00000301019 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
CDT1-201ENST00000301019 IGKV1D-17A0A075B6S4 117 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 TRBV7-9A0A0J9YWB2 115 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 DLL1O00548 723 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
CDT1-201ENST00000301019 PRCDQ00LT1 54 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 E9PLD3 99 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 LOXL3P58215 753 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDT1-201ENST00000301019 LGALS9BQ3B8N2 356 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 LGALS9CQ6DKI2 356 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 SPRY3O43610 288 aa11.47□□□□□ -0.57
CDT1-201ENST00000301019 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
CDT1-201ENST00000301019 APC2O95996 2303 aa11.46□□□□□ -0.57
CDT1-201ENST00000301019 NTN3O00634 580 aaPredicted RBP11.46□□□□□ -0.57
CDT1-201ENST00000301019 Q86TA4 180 aa11.46□□□□□ -0.57
CDT1-201ENST00000301019 TM2D2Q9BX73 214 aa11.46□□□□□ -0.57
CDT1-201ENST00000301019 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.58
CDT1-201ENST00000301019 SS18L1O75177 396 aaPredicted RBP11.46□□□□□ -0.58
CDT1-201ENST00000301019 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.58
CDT1-201ENST00000301019 ZNF562Q6V9R5 426 aa11.46□□□□□ -0.58
CDT1-201ENST00000301019 MOGAT3Q86VF5 341 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms