RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 HBBP68871 147 aa12.41□□□□□ -0.42
NCKIPSD-201ENST00000294129 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-201ENST00000294129 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 IGLV2-11P01706 119 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 PAX2Q02962 417 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 TMEM14CQ9P0S9 112 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
NCKIPSD-201ENST00000294129 CSPG4Q6UVK1 2322 aa12.4□□□□□ -0.43
NCKIPSD-201ENST00000294129 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGLC2P0DOY2 106 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 Q8N976 141 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 ACACBO00763 2458 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 WIPF2Q8TF74 440 aaPredicted RBP12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 F8W735 103 aaPredicted RBP12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 C3orf79P0CE67 100 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 SAA4P35542 130 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 NIT1Q86X76 327 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZFYVE26Q68DK2 2539 aa12.39□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 M0R2Z0 102 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 CHEK1O14757 476 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 PSG8Q9UQ74 426 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 UTP20O75691 2785 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV3-66A0A0C4DH42 116 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 GPR183P32249 361 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 RBPMS2Q6ZRY4 209 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-201ENST00000294129 CENPEQ02224 2701 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 ABCA2Q9BZC7 2435 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 UNQ5815/PRO19632Q6UWF5 114 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 NPIPB5A8MRT5 1133 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZNF138P52744 262 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 RASL11AQ6T310 242 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 AAMDCQ9H7C9 122 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 CLEC5AQ9NY25 188 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 THYN1Q9P016 225 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 CELSR2Q9HCU4 2923 aa12.37□□□□□ -0.43
NCKIPSD-201ENST00000294129 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 G3V318 75 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 K7EQM0 130 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 CSN3P07498 182 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 FAM106CPP0CH98 169 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 EFNA4P52798 201 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 Q8N9W7 124 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 ITLN2Q8WWU7 325 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV3-49A0A0A0MS15 119 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 IGHV2-70DA0A0C4DH43 119 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 TRAV30A0A087WSZ9 112 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZNF785A8K8V0 405 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 EGR2P11161 476 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 TXN2Q99757 166 aa12.36□□□□□ -0.43
NCKIPSD-201ENST00000294129 ATP6V0E1O15342 81 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 PSG3Q16557 428 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 C15orf32Q32M92 178 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 Q8N6K4 173 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 Q8TAT8 98 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
NCKIPSD-201ENST00000294129 CTSGP08311 255 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 CTRLP40313 264 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 COL5A1-AS1Q5SY13 56 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 Q6ZN92 141 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 C1orf122Q6ZSJ8 110 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 ZNF207O43670 478 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms