RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 TMEM42Q69YG0 159 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 SRRM5B3KS81 715 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 EVI2AP22794 236 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 RHOGP84095 191 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 CD300EQ496F6 205 aaPredicted RBP9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
SYNGAP1-201ENST00000293748 CD7P09564 240 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 PSG1P11464 419 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 CENPVQ7Z7K6 275 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 POLR3KQ9Y2Y1 108 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 MED12Q93074 2177 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 CD33P20138 364 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRGV9Q99603 122 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 SHANK1Q9Y566 2161 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 DMXL1Q9Y485 3027 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 TRAV12-3A0A0B4J271 114 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 GRNP28799 593 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 BSPH1Q075Z2 132 aa9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-201ENST00000293748 NPIPB5A8MRT5 1133 aa9.65□□□□□ -0.87
SYNGAP1-201ENST00000293748 FNDC10F2Z333 226 aa9.65□□□□□ -0.87
SYNGAP1-201ENST00000293748 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.87
SYNGAP1-201ENST00000293748 PPIFP30405 207 aaKnown RBP9.65□□□□□ -0.87
SYNGAP1-201ENST00000293748 SLC25A39Q9BZJ4 359 aaPredicted RBP9.65□□□□□ -0.87
SYNGAP1-201ENST00000293748 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 M0R2P5 195 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 OVOL1O14753 267 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 MYOD1P15172 320 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 FGFBP3Q8TAT2 258 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 CREBBPQ92793 2442 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 SPAG8Q99932 426 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 ROS1P08922 2347 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGHV2-5P01817 119 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 ATP5J2P56134 94 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 C3orf36Q3SXR2 165 aa9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-201ENST00000293748 CD28P10747 220 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 C10orf91Q5T1B1 145 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 LYZL1Q6UWQ5 148 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 TMEM167AQ8TBQ9 72 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 C15orf62A8K5M9 175 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 NCR2O95944 276 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 NTF4P34130 210 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 OCIAD2Q56VL3 154 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 ZC2HC1BQ5TFG8 222 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 PCNX1Q96RV3 2341 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 A0A1B0GWJ7 208 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 SMAD7O15105 426 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 SLC25A20O43772 301 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 PSPNO60542 156 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 NPFFR1Q9GZQ6 430 aa9.63□□□□□ -0.87
SYNGAP1-201ENST00000293748 FASNP49327 2511 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 SPTAN1Q13813 2472 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 EML6Q6ZMW3 1958 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 EXPH5Q8NEV8 1989 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 HEATR5AQ86XA9 2040 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 ITGB1BP1O14713 200 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 LINC01587Q99440 93 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
SYNGAP1-201ENST00000293748 PRTN3P24158 256 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 TMEM249Q2WGJ8 235 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 ASCL4Q6XD76 172 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 TRGV11A0A075B6L2 103 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 PSG3Q16557 428 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 C10orf55Q5SWW7 151 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 GFRA4Q9GZZ7 299 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 TOMM40O96008 361 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 RNF5Q99942 180 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGLC2P0DOY2 106 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGLC3P0DOY3 106 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 SCRT1Q9BWW7 348 aa9.61□□□□□ -0.87
SYNGAP1-201ENST00000293748 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 TFF1P04155 84 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 GAGE1Q13065 139 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 FAM231BA6NCW3 169 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 ADAMTSL5Q6ZMM2 481 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 Q6ZRM9 215 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 TMEM86BQ8N661 226 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 MBNL3Q9NUK0 354 aaKnown RBP9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 TIMM23O14925 209 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 MMP23AO75900 390 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms