RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TMEM250H0YL14 139 aa14.36□□□□□ -0.11
PDLIM3-202ENST00000284770 APOC3P02656 99 aa14.36□□□□□ -0.11
PDLIM3-202ENST00000284770 CBLN1P23435 193 aa14.36□□□□□ -0.11
PDLIM3-202ENST00000284770 CCDC28AQ8IWP9 274 aa14.36□□□□□ -0.11
PDLIM3-202ENST00000284770 TENM1Q9UKZ4 2725 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 NBEAP1P0C6P0 100 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 IGLC2P0DOY2 106 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 HIST1H1EP10412 219 aaKnown RBP14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 BMI1P35226 326 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 SOHLH1Q5JUK2 328 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 C12orf54Q6X4T0 127 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 C3orf56Q8N813 242 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 OR4F17Q8NGA8 305 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 GLMPQ8WWB7 406 aa14.35□□□□□ -0.11
PDLIM3-202ENST00000284770 GGTLC3B5MD39 225 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 PDE6DO43924 150 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 SNRPCP09234 159 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 FOLR2P14207 255 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 GUCA2BQ16661 112 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 H3BQ15 152 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 OVOL1O14753 267 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 GALR1P47211 349 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 CEBPGP53567 150 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 ELOVL1Q9BW60 279 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 ZNF586Q9NXT0 402 aa14.34□□□□□ -0.11
PDLIM3-202ENST00000284770 PF4P02776 101 aa14.33□□□□□ -0.12
PDLIM3-202ENST00000284770 CSN3P07498 182 aa14.33□□□□□ -0.12
PDLIM3-202ENST00000284770 SIGLEC15Q6ZMC9 328 aa14.33□□□□□ -0.12
PDLIM3-202ENST00000284770 ADAMTSL5Q6ZMM2 481 aa14.33□□□□□ -0.12
PDLIM3-202ENST00000284770 BLNKQ8WV28 456 aa14.33□□□□□ -0.12
PDLIM3-202ENST00000284770 F6UZH7 168 aa14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 M0QZ24 198 aa14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 HELTA6NFD8 242 aa14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 ATF4P18848 351 aaPredicted RBP14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 SHISA2Q6UWI4 295 aa14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 NKX6-2Q9C056 277 aaPredicted RBP14.32□□□□□ -0.12
PDLIM3-202ENST00000284770 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 A0A087X0K7 114 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 SCO2A0A1W2PP80 73 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 ZNF785A8K8V0 405 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 H3BTX0 84 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 SVBPQ8N300 66 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 C11orf52Q96A22 123 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 C17orf77Q96MU5 243 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 MLXQ9UH92 298 aa14.31□□□□□ -0.12
PDLIM3-202ENST00000284770 NDUFB4O95168 129 aa14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 RANP62826 216 aaKnown RBP14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 PDE6HQ13956 83 aa14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 LINC00482Q8N8I6 264 aa14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 PARLQ9H300 379 aa14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 SIGLEC8Q9NYZ4 499 aa14.3□□□□□ -0.12
PDLIM3-202ENST00000284770 TCF24Q7RTU0 167 aa14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 RPUSD4Q96CM3 377 aaKnown RBP14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 MEOX2P50222 304 aa14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 RPL11P62913 178 aaKnown RBP14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 ATRAIDQ6UW56 229 aa14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.29□□□□□ -0.12
PDLIM3-202ENST00000284770 ZNF253O75346 499 aa14.28□□□□□ -0.12
PDLIM3-202ENST00000284770 DERL1Q9BUN8 251 aa14.28□□□□□ -0.12
PDLIM3-202ENST00000284770 Q9H3A6 140 aa14.28□□□□□ -0.12
PDLIM3-202ENST00000284770 SELENOKQ9Y6D0 94 aa14.28□□□□□ -0.12
PDLIM3-202ENST00000284770 ZNF727A8MUV8 499 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 SLC17A3O00476 420 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 FAM74A3Q4VXF1 159 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 LYPD1Q8N2G4 141 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 SMIM7Q9BQ49 75 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 NIPSNAP3BQ9BS92 247 aa14.27□□□□□ -0.12
PDLIM3-202ENST00000284770 PGPA6NDG6 321 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 ZNF674Q2M3X9 581 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 DYNLRB2Q8TF09 96 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 C2CD4CQ8TF44 421 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 TCEAL7Q9BRU2 100 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 NRN1Q9NPD7 142 aa14.27□□□□□ -0.13
PDLIM3-202ENST00000284770 WNK1Q9H4A3 2382 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 SNAPINO95295 136 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 PSG9Q00887 426 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 DEFB114Q30KQ6 69 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 CLRN3Q8NCR9 226 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 OTORQ9NRC9 128 aa14.26□□□□□ -0.13
PDLIM3-202ENST00000284770 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
PDLIM3-202ENST00000284770 SLC50A1Q9BRV3 221 aa14.25□□□□□ -0.13
PDLIM3-202ENST00000284770 ZNF331Q9NQX6 463 aaPredicted RBP14.25□□□□□ -0.13
PDLIM3-202ENST00000284770 SAP30O75446 220 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 SCO1O75880 301 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 EXOC3-AS1Q8N2X6 119 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 C5orf17Q8NAS9 161 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 SDF2L1Q9HCN8 221 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 COL6A5A8TX70 2615 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 TRBV20OR9-2A0A075B6H5 130 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 SLC25A5P05141 298 aaKnown RBP14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 TVP23CQ96ET8 276 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 AAMDCQ9H7C9 122 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 NAT8Q9UHE5 227 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 EPDR1Q9UM22 224 aa14.24□□□□□ -0.13
PDLIM3-202ENST00000284770 PEX7O00628 323 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 RPL35P42766 123 aaKnown RBP14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 GNG5P63218 68 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms