RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 IGKV2D-24A0A075B6R9 120 aa10.83□□□□□ -0.68
SMARCA5-201ENST00000283131 RNASE2P10153 161 aaKnown RBP10.83□□□□□ -0.68
SMARCA5-201ENST00000283131 ZNF329Q86UD4 541 aa10.83□□□□□ -0.68
SMARCA5-201ENST00000283131 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
SMARCA5-201ENST00000283131 CRYBA4P53673 196 aa10.83□□□□□ -0.68
SMARCA5-201ENST00000283131 A0A1B0GX51 115 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 SYNJ2BPP57105 145 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 OR11H6Q8NGC7 330 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 ARAP2Q8WZ64 1704 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 DKK1O94907 266 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 GZMMP51124 257 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 SLAQ13239 276 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 HEPN1Q6WQI6 88 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 CHCHD2Q9Y6H1 151 aaPredicted RBP10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 C1orf194Q5T5A4 169 aa10.82□□□□□ -0.68
SMARCA5-201ENST00000283131 BRD3OSQ6XYD6 125 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 PROP1O75360 226 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 MCRIP2Q9BUT9 160 aaKnown RBP10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 MRPS18CQ9Y3D5 142 aaKnown RBP10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 PLCH1Q4KWH8 1693 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 LAMB2P55268 1798 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 F6UB75 175 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 RNF5Q99942 180 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 LINC01590Q5TEZ4 76 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 RPL18AQ02543 176 aaKnown RBP10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 IGF2BP2-AS1Q96M15 143 aa10.81□□□□□ -0.68
SMARCA5-201ENST00000283131 A0A1W2PR77 199 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 GAGE7O76087 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 USF3Q68DE3 2245 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 BUB3O43684 328 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 IGKV1OR2-108A0A075B7D4 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 KNCNA6PVL3 124 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 M0R1W7 72 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 PATJQ8NI35 1801 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 A8MWP6 167 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 ARMS2P0C7Q2 107 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 FAM110DQ8TAY7 271 aaPredicted RBP10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 IGHV1-8P0DP01 117 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 HLA-DRB4P13762 266 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 HLA-DRB4X5D2U9 266 aa10.8□□□□□ -0.68
SMARCA5-201ENST00000283131 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 F8W1H4 67 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 CFHR2P36980 270 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 CARD19Q96LW7 228 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 TIAF1O95411 115 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 ORMDL1Q9P0S3 153 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 MBD3L4A6NDZ8 208 aaPredicted RBP10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 MBD3L3A6NE82 208 aaPredicted RBP10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 MBD3L5A6NJ08 208 aaPredicted RBP10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 MBD3L2Q8NHZ7 208 aaPredicted RBP10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 CFHR4Q92496 578 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 WDR83OSQ9Y284 106 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 GREM1O60565 184 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 TREML4Q6UXN2 200 aa10.79□□□□□ -0.68
SMARCA5-201ENST00000283131 ZNF883P0CG24 379 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 ZNRF2Q8NHG8 242 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 HIST3H2BBQ8N257 126 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 IGHV1-46P01743 117 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 HERVK_113P63121 156 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 LINC01619G3V211 115 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 AGMATQ9BSE5 352 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 SLC25A16P16260 332 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 WBP1Q96G27 269 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 Q9HAA7 133 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
SMARCA5-201ENST00000283131 MST1LQ2TV78 715 aa10.77□□□□□ -0.68
SMARCA5-201ENST00000283131 NCKAP5O14513 1909 aa10.77□□□□□ -0.68
SMARCA5-201ENST00000283131 RS1O15537 224 aa10.77□□□□□ -0.68
SMARCA5-201ENST00000283131 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.68
SMARCA5-201ENST00000283131 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 TIRAPP58753 221 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 PAX9P55771 341 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 MUC4Q99102 2169 aa10.77□□□□□ -0.69
SMARCA5-201ENST00000283131 CTHRC1Q96CG8 243 aa10.76□□□□□ -0.69
SMARCA5-201ENST00000283131 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
SMARCA5-201ENST00000283131 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
SMARCA5-201ENST00000283131 PDE6HQ13956 83 aa10.76□□□□□ -0.69
SMARCA5-201ENST00000283131 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms