RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 COL5A1-AS1Q5SY13 56 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 C19orf35Q6ZS72 473 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 FAM57AQ8TBR7 257 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MBD3L1Q8WWY6 194 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 ELOVL5Q9NYP7 299 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3-66A0A0C4DH42 116 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1-6A0A0C4DH72 117 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LY6G6EA0A0G2JKS1 128 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 DPRXA6NFQ7 191 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 LINC00473A8K010 186 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 MGPP08493 103 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 PYYP10082 97 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 HOXD3P31249 432 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 RPL24P83731 157 aaKnown RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 FAM53AQ6NSI3 398 aaPredicted RBP2.31□□□□□ -2.04
HERC4-201ENST00000277817 DNM1P46Q6ZS02 220 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TMEM144Q7Z5S9 345 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 CD177Q8N6Q3 437 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 SLC25A33Q9BSK2 321 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 TMEM208Q9BTX3 173 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 IL36BQ9NZH7 164 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 U3KQA8 63 aa2.31□□□□□ -2.04
HERC4-201ENST00000277817 DOCK11Q5JSL3 2073 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 TRAV5A0A0B4J249 113 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 UPK2O00526 184 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 CA1P00915 261 aaPredicted RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 IGHV1-46P01743 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 MYOD1P15172 320 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 RPL7P18124 248 aaKnown RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 UQCRFS1P47985 274 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 SRSF7Q16629 238 aaKnown RBP eCLIP2.3□□□□□ -2.04
HERC4-201ENST00000277817 Q1RN00 199 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 TMEM78Q5T7P6 136 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 Q6P435 159 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GTF2H5Q6ZYL4 71 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 KIR3DL3Q8N743 410 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 ST6GALNAC3Q8NDV1 305 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 MYOZ3Q8TDC0 251 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 C14orf144Q96I85 54 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 CYYR1Q96J86 154 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 MRPL32Q9BYC8 188 aaKnown RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 LINC00312Q9Y6C7 94 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 WDFY3Q8IZQ1 3526 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 OR4C46A6NHA9 309 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 C15orf61A6NNL5 157 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 ETV2O00321 342 aaPredicted RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 PEX7O00628 323 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 FOXH1O75593 365 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE7O76087 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE12FP0CL80 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE12GP0CL81 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE12IP0CL82 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 FOLR2P14207 255 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 PAX1P15863 534 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 TMPRSS3P57727 454 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GNG5P63218 68 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 MEF2CQ06413 473 aaPredicted RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE1Q13065 139 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 GAGE4Q13068 117 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 LY6EQ16553 131 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 MLANAQ16655 118 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 ZNF585BQ52M93 769 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 C10orf55Q5SWW7 151 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 SPATA31B1PQ5VZV4 182 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 CYB5R2Q6BCY4 276 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 SCGB1D4Q6XE38 83 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 FOXL2NBQ6ZUU3 175 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 OR4B1Q8NGF8 309 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 FAM218AQ96MZ4 157 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 DPM3Q9P2X0 92 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 TBL2Q9Y4P3 447 aaKnown RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 SRRM5B3KS81 715 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 J3QR89 54 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 SERF1AO75920 110 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 FRMD6-AS1P0C7T7 363 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 CA7P43166 264 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 PAX2Q02962 417 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 PMCHL1Q16048 86 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 TMEM14EPQ6UXP3 125 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 Q6ZPA2 131 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 KCNS1Q96KK3 526 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 HIST1H2BLQ99880 126 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 UQCR10Q9UDW1 63 aa2.3□□□□□ -2.04
HERC4-201ENST00000277817 LAMA2P24043 3122 aaKnown RBP2.3□□□□□ -2.04
HERC4-201ENST00000277817 PCNX2A6NKB5 2137 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TRAV30A0A087WSZ9 112 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 IGHV4-28A0A0C4DH34 117 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 FOXI3A8MTJ6 420 aaPredicted RBP2.29□□□□□ -2.04
HERC4-201ENST00000277817 HIGD1CA8MV81 97 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 HBBP68871 147 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TMEM30BQ3MIR4 351 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 C2orf83Q53S99 150 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TCF24Q7RTU0 167 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms