RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TUBA4BQ9H853 241 aa18.84■□□□□ 0.61
SSBP4-201ENST00000270061 BMPR1BO00238 502 aa18.83■□□□□ 0.61
SSBP4-201ENST00000270061 RELQ04864 619 aaPredicted RBP18.83■□□□□ 0.61
SSBP4-201ENST00000270061 RNF152Q8N8N0 203 aa18.83■□□□□ 0.61
SSBP4-201ENST00000270061 ZFAND3Q9H8U3 227 aa18.83■□□□□ 0.61
SSBP4-201ENST00000270061 A0A0G2JLM5 398 aa18.83■□□□□ 0.6
SSBP4-201ENST00000270061 TOMM20LQ6UXN7 152 aa18.83■□□□□ 0.6
SSBP4-201ENST00000270061 RABAC1Q9UI14 185 aa18.83■□□□□ 0.6
SSBP4-201ENST00000270061 DNAH3Q8TD57 4116 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 IGLL1P15814 213 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 RAB9AP51151 201 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 RPL23P62829 140 aaKnown RBP18.82■□□□□ 0.6
SSBP4-201ENST00000270061 DERL1Q9BUN8 251 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 ELOVL1Q9BW60 279 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 KLK15Q9H2R5 256 aa18.82■□□□□ 0.6
SSBP4-201ENST00000270061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.81■□□□□ 0.6
SSBP4-201ENST00000270061 MRPS12O15235 138 aaKnown RBP18.81■□□□□ 0.6
SSBP4-201ENST00000270061 PSMB8P28062 276 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 AKR1C3P42330 323 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 LINC00482Q8N8I6 264 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-201ENST00000270061 TMEM190Q8WZ59 177 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 CRYBB3P26998 211 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 CDX1P47902 265 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-201ENST00000270061 C2CD4CQ8TF44 421 aa18.81■□□□□ 0.6
SSBP4-201ENST00000270061 BLNKQ8WV28 456 aa18.8■□□□□ 0.6
SSBP4-201ENST00000270061 GNB4Q9HAV0 340 aa18.8■□□□□ 0.6
SSBP4-201ENST00000270061 ZNF586Q9NXT0 402 aa18.8■□□□□ 0.6
SSBP4-201ENST00000270061 PRELID1Q9Y255 219 aa18.8■□□□□ 0.6
SSBP4-201ENST00000270061 C9JCJ5 164 aa18.79■□□□□ 0.6
SSBP4-201ENST00000270061 IGLC2P0DOY2 106 aa18.79■□□□□ 0.6
SSBP4-201ENST00000270061 RANP62826 216 aaKnown RBP18.79■□□□□ 0.6
SSBP4-201ENST00000270061 TMEM242Q9NWH2 141 aa18.79■□□□□ 0.6
SSBP4-201ENST00000270061 TSPAN4O14817 238 aa18.78■□□□□ 0.6
SSBP4-201ENST00000270061 ADIRFQ15847 76 aa18.78■□□□□ 0.6
SSBP4-201ENST00000270061 FAM209BQ5JX69 171 aa18.78■□□□□ 0.6
SSBP4-201ENST00000270061 LY96Q9Y6Y9 160 aa18.78■□□□□ 0.6
SSBP4-201ENST00000270061 ARL3P36405 182 aa18.78■□□□□ 0.6
SSBP4-201ENST00000270061 RPL35P42766 123 aaKnown RBP18.78■□□□□ 0.6
SSBP4-201ENST00000270061 TRBV20OR9-2A0A075B6H5 130 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 HELTA6NFD8 242 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 CCL24O00175 119 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 PRB2P02812 416 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-201ENST00000270061 LINC01551Q86U37 167 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 HIST1H2BAQ96A08 127 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 RAX2Q96IS3 184 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 DUX3Q96PT4 197 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 CTDSP1Q9GZU7 261 aa18.77■□□□□ 0.6
SSBP4-201ENST00000270061 TRBV19A0A075B6N1 114 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 IGHV3-35A0A0C4DH35 117 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 PGPA6NDG6 321 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 CXorf65A6NEN9 183 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 PPP5D1E7EU14 171 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 RPL7P18124 248 aaKnown RBP18.76■□□□□ 0.59
SSBP4-201ENST00000270061 REC114Q7Z4M0 266 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 LYPD1Q8N2G4 141 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 OTORQ9NRC9 128 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 SNRPCP09234 159 aaKnown RBP18.76■□□□□ 0.59
SSBP4-201ENST00000270061 DEFB136Q30KP8 78 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 C15orf54Q8N8G6 183 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 MYOZ3Q8TDC0 251 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 C4orf3Q8WVX3 66 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 Q9H3A6 140 aa18.76■□□□□ 0.59
SSBP4-201ENST00000270061 PDE6HQ13956 83 aa18.75■□□□□ 0.59
SSBP4-201ENST00000270061 UBE2E2Q96LR5 201 aa18.75■□□□□ 0.59
SSBP4-201ENST00000270061 EPDR1Q9UM22 224 aa18.75■□□□□ 0.59
SSBP4-201ENST00000270061 MT-ND4LP03901 98 aa18.74■□□□□ 0.59
SSBP4-201ENST00000270061 RNF212Q495C1 297 aa18.74■□□□□ 0.59
SSBP4-201ENST00000270061 C5orf17Q8NAS9 161 aa18.74■□□□□ 0.59
SSBP4-201ENST00000270061 COLCA2A8K830 154 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 NDUFA4O00483 81 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 PEX7O00628 323 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 TAS2R60P59551 318 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 U3KQE9 123 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 BUB3O43684 328 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 SLC25A5P05141 298 aaKnown RBP18.73■□□□□ 0.59
SSBP4-201ENST00000270061 C1orf194Q5T5A4 169 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 OCC1Q8TAD7 63 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 METTL26Q96S19 204 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 MCRIP2Q9BUT9 160 aaKnown RBP18.73■□□□□ 0.59
SSBP4-201ENST00000270061 GPR61Q9BZJ8 451 aa18.73■□□□□ 0.59
SSBP4-201ENST00000270061 TRBV12-3P01733 135 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 IGHV3-11P01762 117 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 OR8I2Q8N0Y5 310 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 ISOC2Q96AB3 205 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 ANAPC16Q96DE5 110 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 GPR82Q96P67 336 aa18.72■□□□□ 0.59
SSBP4-201ENST00000270061 H3BTX0 84 aa18.71■□□□□ 0.59
SSBP4-201ENST00000270061 CNN1P51911 297 aaKnown RBP18.71■□□□□ 0.59
SSBP4-201ENST00000270061 YPEL4Q96NS1 127 aa18.71■□□□□ 0.59
SSBP4-201ENST00000270061 IGHV3OR16-8A0A075B7F1 116 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 GNG4P50150 75 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 SIGLEC15Q6ZMC9 328 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 C17orf77Q96MU5 243 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 ATG101Q9BSB4 218 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 KLF12Q9Y4X4 402 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 GGCTO75223 188 aaKnown RBP18.7■□□□□ 0.58
SSBP4-201ENST00000270061 CENPWQ5EE01 88 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 OR11H1Q8NG94 326 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 DPF1Q92782 380 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms