RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
COPS3-201ENST00000268717 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 H7BYZ3 331 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 BUB3O43684 328 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 MEOX2P50222 304 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 FOXE3Q13461 319 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 SIGLEC15Q6ZMC9 328 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 OCC1Q8TAD7 63 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 METTL26Q96S19 204 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 U3KQE9 123 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 A0A087X0K7 114 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 TMEM95Q3KNT9 176 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 TEX38Q6PEX7 206 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 MYOZ3Q8TDC0 251 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 SFRP2Q96HF1 295 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
COPS3-201ENST00000268717 TENM1Q9UKZ4 2725 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 DNAJC9-AS1A6NH13 148 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 TCRAP04437 139 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 PSG9Q00887 426 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 ELOBQ15370 118 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 OR4X2Q8NGF9 303 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 FMC1Q96HJ9 113 aa11.81□□□□□ -0.52
COPS3-201ENST00000268717 TRBV24-1A0A075B6N3 115 aa11.8□□□□□ -0.52
COPS3-201ENST00000268717 SERTM2A0A1B0GWG4 89 aa11.8□□□□□ -0.52
COPS3-201ENST00000268717 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
COPS3-201ENST00000268717 RPL15P61313 204 aaKnown RBP11.8□□□□□ -0.52
COPS3-201ENST00000268717 CMTM2Q8TAZ6 248 aa11.8□□□□□ -0.52
COPS3-201ENST00000268717 DUX5Q96PT3 197 aa11.8□□□□□ -0.52
COPS3-201ENST00000268717 OR5B12Q96R08 314 aa11.8□□□□□ -0.52
COPS3-201ENST00000268717 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 K7EN84 100 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 GCGP01275 180 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 RAB5AP20339 215 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 GALR1P47211 349 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 UBE2G1P62253 170 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 AAMDCQ9H7C9 122 aa11.79□□□□□ -0.52
COPS3-201ENST00000268717 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
COPS3-201ENST00000268717 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
COPS3-201ENST00000268717 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
COPS3-201ENST00000268717 S100PP25815 95 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 H3BTX0 84 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 SLC17A3O00476 420 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 ISLRO14498 428 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 TRBV12-3P01733 135 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
COPS3-201ENST00000268717 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
COPS3-201ENST00000268717 GNG5P63218 68 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 OR10G8Q8NGN5 311 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 PYGO2Q9BRQ0 406 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
COPS3-201ENST00000268717 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
COPS3-201ENST00000268717 K7EQM0 130 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 LTAP01374 205 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 KCNIP4Q6PIL6 250 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 SERTAD4Q9NUC0 356 aa11.77□□□□□ -0.53
COPS3-201ENST00000268717 K7EMT4 169 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 CRYBA1P05813 215 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 FOXL1Q12952 345 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 C16orf54Q6UWD8 224 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 FAM231DQ6ZW35 169 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 GPHB5Q86YW7 130 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 C1QL4Q86Z23 238 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 UBE2E2Q96LR5 201 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 MLST8Q9BVC4 326 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
COPS3-201ENST00000268717 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
COPS3-201ENST00000268717 TRAV9-1A0A075B6T8 112 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 A0A1W2PS18 150 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 CSN1S1P47710 185 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 GRAMD2BQ96HH9 432 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
COPS3-201ENST00000268717 IGHV3OR16-8A0A075B7F1 116 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 DIRC3C9JPN6 131 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 LGALS1P09382 135 aaKnown RBP11.75□□□□□ -0.53
COPS3-201ENST00000268717 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
COPS3-201ENST00000268717 RPLP1P05386 114 aaKnown RBP11.74□□□□□ -0.53
COPS3-201ENST00000268717 CXCL1P09341 107 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms