RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TMEM41BQ5BJD5 291 aa12.22□□□□□ -0.45
SNRPF-201ENST00000266735 FAM122CQ6P4D5 195 aa12.22□□□□□ -0.45
SNRPF-201ENST00000266735 LRRC20Q8TCA0 184 aa12.22□□□□□ -0.45
SNRPF-201ENST00000266735 CITED4Q96RK1 184 aa12.22□□□□□ -0.45
SNRPF-201ENST00000266735 OR51M1Q9H341 326 aa12.22□□□□□ -0.45
SNRPF-201ENST00000266735 H3BQ15 152 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 HIST1H1EP10412 219 aaKnown RBP12.21□□□□□ -0.45
SNRPF-201ENST00000266735 CDC34P49427 236 aaPredicted RBP12.21□□□□□ -0.45
SNRPF-201ENST00000266735 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 BAP18Q8IXM2 172 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 C9orf62Q8N4C0 152 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 RPP25LQ8N5L8 163 aaKnown RBP12.21□□□□□ -0.45
SNRPF-201ENST00000266735 STOML3Q8TAV4 291 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 LINC00052Q96N35 136 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
SNRPF-201ENST00000266735 TRAV8-2A0A0B4J237 113 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 OR7C2O60412 319 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF253O75346 499 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
SNRPF-201ENST00000266735 PYYP10082 97 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF124Q15973 351 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
SNRPF-201ENST00000266735 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 PAXXQ9BUH6 204 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
SNRPF-201ENST00000266735 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
SNRPF-201ENST00000266735 TRBV19A0A075B6N1 114 aa12.19□□□□□ -0.46
SNRPF-201ENST00000266735 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 PDE6HQ13956 83 aa12.19□□□□□ -0.46
SNRPF-201ENST00000266735 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
SNRPF-201ENST00000266735 CLEC5AQ9NY25 188 aa12.19□□□□□ -0.46
SNRPF-201ENST00000266735 H3BTX0 84 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 FOXI2Q6ZQN5 318 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 SLC51BQ86UW2 128 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 STHQ8IWL8 128 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 C20orf173Q96LM9 149 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 SORL1Q92673 2214 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 SLC17A3O00476 420 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 OR10J4P0C629 311 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 NBEAP1P0C6P0 100 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
SNRPF-201ENST00000266735 PSG9Q00887 426 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 ACTL10Q5JWF8 245 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 IGFL4Q6B9Z1 124 aa12.18□□□□□ -0.46
SNRPF-201ENST00000266735 EIF5AL1Q6IS14 154 aaKnown RBP12.18□□□□□ -0.46
SNRPF-201ENST00000266735 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.467e-7■■■■■ 45
SNRPF-201ENST00000266735 APOC4P55056 127 aa12.17□□□□□ -0.46
SNRPF-201ENST00000266735 PSG3Q16557 428 aa12.17□□□□□ -0.46
SNRPF-201ENST00000266735 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
SNRPF-201ENST00000266735 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
SNRPF-201ENST00000266735 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
SNRPF-201ENST00000266735 SAV1Q9H4B6 383 aaPredicted RBP12.17□□□□□ -0.46
SNRPF-201ENST00000266735 KIR2DL5BA0A0G2JN68 375 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 KIR2DL5BA0A0G2JPC4 375 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 CTXND1A0A1B0GTU2 59 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
SNRPF-201ENST00000266735 NDUFB4O95168 129 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 HLA-DRB4P13762 266 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 RPL35AP18077 110 aaKnown RBP12.16□□□□□ -0.46
SNRPF-201ENST00000266735 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
SNRPF-201ENST00000266735 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 KIR2DL5AQ8N109 375 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 KIR2DL5BQ8NHK3 375 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 HLA-DRB4X5D2U9 266 aa12.16□□□□□ -0.46
SNRPF-201ENST00000266735 H3BMM0 161 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 NKX2-5P52952 324 aaPredicted RBP12.15□□□□□ -0.46
SNRPF-201ENST00000266735 HAGHQ16775 308 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 TMED6Q8WW62 240 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
SNRPF-201ENST00000266735 A0A0J9YX75 114 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 CXorf1O96002 111 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
SNRPF-201ENST00000266735 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
SNRPF-201ENST00000266735 ASCL2Q99929 193 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
SNRPF-201ENST00000266735 F6UB75 175 aa12.13□□□□□ -0.47
SNRPF-201ENST00000266735 UBE2CO00762 179 aa12.13□□□□□ -0.47
SNRPF-201ENST00000266735 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
SNRPF-201ENST00000266735 DEFB1P60022 68 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms