RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
PRPF6-201ENST00000266079 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 KIR2DS2P43631 304 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
PRPF6-201ENST00000266079 ZC2HC1AQ96GY0 325 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
PRPF6-201ENST00000266079 SEC11AP67812 179 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
PRPF6-201ENST00000266079 HBBP68871 147 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 OR4S2Q8NH73 311 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
PRPF6-201ENST00000266079 C2orf91Q6ZV80 131 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 FAM167A-AS1Q96KT0 104 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 HINT2Q9BX68 163 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 BEX4Q9NWD9 120 aaPredicted RBP10.03□□□□□ -0.8
PRPF6-201ENST00000266079 IGHV3-72A0A0B4J1Y9 119 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 PEX7O00628 323 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
PRPF6-201ENST00000266079 DDB2Q92466 427 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
PRPF6-201ENST00000266079 TMEM133Q9H2Q1 129 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 C7orf69Q9H7B7 122 aa10.03□□□□□ -0.8
PRPF6-201ENST00000266079 ENSAO43768 121 aaKnown RBP10.02□□□□□ -0.8
PRPF6-201ENST00000266079 COX8AP10176 69 aa10.02□□□□□ -0.8
PRPF6-201ENST00000266079 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.8
PRPF6-201ENST00000266079 SLC25A2Q9BXI2 301 aa10.02□□□□□ -0.8
PRPF6-201ENST00000266079 FNDC4Q9H6D8 234 aaPredicted RBP10.02□□□□□ -0.8
PRPF6-201ENST00000266079 TRAV5A0A0B4J249 113 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 MYOD1P15172 320 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 HTR1DP28221 377 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 BPIFA4PQ86YQ2 179 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
PRPF6-201ENST00000266079 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
PRPF6-201ENST00000266079 FOXE3Q13461 319 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 ZNF329Q86UD4 541 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 TNCP24821 2201 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 NAV3Q8IVL0 2385 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 TGFAP01135 160 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 APOA2P02652 100 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 CD24P25063 80 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 MORN5Q5VZ52 161 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 KRTAP1-3Q8IUG1 177 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 OR9G1Q8NH87 305 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 AP1S3Q96PC3 154 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 SLC25A16P16260 332 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 DSCR9P59020 149 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 LINC01545Q5VT33 79 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 SLC25A48Q6ZT89 311 aaKnown RBP10.01□□□□□ -0.81
PRPF6-201ENST00000266079 C8orf46Q8TAG6 207 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
PRPF6-201ENST00000266079 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
PRPF6-201ENST00000266079 C5orf17Q8NAS9 161 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 HSPB8Q9UJY1 196 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 SOX21Q9Y651 276 aaPredicted RBP10□□□□□ -0.81
PRPF6-201ENST00000266079 PSMB11A5LHX3 300 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 H0Y8G0 127 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 H3BRM9 83 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 MSMBP08118 114 aa10□□□□□ -0.81
PRPF6-201ENST00000266079 K7EP34 96 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 PYYP10082 97 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 MLANAQ16655 118 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 BRD3OSQ6XYD6 125 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 NEGR1Q7Z3B1 354 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 JMJD8Q96S16 334 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 MRPL20Q9BYC9 149 aaKnown RBP9.99□□□□□ -0.81
PRPF6-201ENST00000266079 NDFIP1Q9BT67 221 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
PRPF6-201ENST00000266079 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
PRPF6-201ENST00000266079 A8MWL6 223 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 SNAI2O43623 268 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 RUSC1-AS1Q66K80 236 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 TMEM186Q96B77 213 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 PRNDQ9UKY0 176 aa9.99□□□□□ -0.81
PRPF6-201ENST00000266079 CR1P17927 2039 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 A0A096LNT2 108 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 TRAV40A0A0B4J280 105 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 PRTN3P24158 256 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 C2orf83Q53S99 150 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 TNFRSF14Q92956 283 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 SIRPDQ9H106 197 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 A6NDN8 102 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 B4DSR2 109 aa9.98□□□□□ -0.81
PRPF6-201ENST00000266079 AVPP01185 164 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms