RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PSG3Q16557 428 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 VWC2Q2TAL6 325 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 COX19Q49B96 90 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 AARDQ4LEZ3 155 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 DEFB121Q5J5C9 76 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 ZFP30Q9Y2G7 519 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 EYSQ5T1H1 3165 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 IGHV4OR15-8A0A075B7B6 117 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 A0A087WW49 117 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ISLRO14498 428 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 GCGP01275 180 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 SRP19P09132 144 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 RNASE4P34096 147 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 CCL20P78556 96 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ZNF343Q6P1L6 599 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 BAGE3Q86Y29 109 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ASCL2Q99929 193 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ZNF702PQ9H963 129 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 GOLT1BQ9Y3E0 138 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 TNCP24821 2201 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 CD28P10747 220 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 C9orf66Q5T8R8 295 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 TMEM88Q6PEY1 159 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 LSM4Q9Y4Z0 139 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 PHLDA3Q9Y5J5 127 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 HELZ2Q9BYK8 2649 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 WDR73Q6P4I2 378 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 NDUFA11Q86Y39 141 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 GPHB5Q86YW7 130 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 OR9G4Q8NGQ1 327 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 LINC00477Q96M19 166 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 ZNF48Q96MX3 618 aaPredicted RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 SAMD10Q9BYL1 202 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 DSPP15924 2871 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-201ENST00000263956 FABP5P3A8MUU1 101 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 LINC01006Q8NI28 216 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 TMEM14CQ9P0S9 112 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 HCFC1P51610 2035 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 ACANP16112 2415 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 TRAV21A0A0B4J279 112 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 K7EMT4 169 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 TCRAP04437 139 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 ZNF138P52744 262 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 IGFL4Q6B9Z1 124 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 TMEM37Q8WXS4 190 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 KCNS1Q96KK3 526 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 ARL2-SNX15V9GYD0 113 aa6.43□□□□□ -1.38
GTF3C3-201ENST00000263956 IGKV2-40A0A087WW87 121 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 CBY3A6NI87 242 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SNURFLB1AK76 121 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 IGKV2D-40P01614 121 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 MRPL54Q6P161 138 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 ASIPP42127 132 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SHISA2Q6UWI4 295 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 TRBV19A0A075B6N1 114 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 M0R3E3 92 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 NDUFA7O95182 113 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 MGPP08493 103 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 CBLN1P23435 193 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 RNF212Q495C1 297 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SAV1Q9H4B6 383 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SDF2L1Q9HCN8 221 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 MTORP42345 2549 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SPTBN5Q9NRC6 3674 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 TRAPPC1Q9Y5R8 145 aa6.42□□□□□ -1.38
GTF3C3-201ENST00000263956 VCANP13611 3396 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 IGSF10Q6WRI0 2623 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 WNK1Q9H4A3 2382 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 TWIST1Q15672 202 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 FAM24BQ8N5W8 94 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 CD81P60033 236 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 PLP1P60201 277 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 SPAG8Q99932 426 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 MRPL36Q9P0J6 103 aaKnown RBP6.41□□□□□ -1.38
GTF3C3-201ENST00000263956 C2orf70A6NJV1 201 aa6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 AMBPP02760 352 aa6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 TRGC1P0CF51 173 aa6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 MUC21Q5SSG8 566 aa6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 SFRP2Q96HF1 295 aa6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 YTHDF2Q9Y5A9 579 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-201ENST00000263956 Q6ZS46 218 aa6.4□□□□□ -1.39
GTF3C3-201ENST00000263956 CCDC140Q96MF4 163 aa6.4□□□□□ -1.39
GTF3C3-201ENST00000263956 C11orf1Q9H5F2 150 aa6.4□□□□□ -1.39
GTF3C3-201ENST00000263956 C9JCJ5 164 aa6.39□□□□□ -1.39
GTF3C3-201ENST00000263956 TRBV12-3P01733 135 aa6.39□□□□□ -1.39
GTF3C3-201ENST00000263956 CD7P09564 240 aa6.39□□□□□ -1.39
GTF3C3-201ENST00000263956 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-201ENST00000263956 RAB5AP20339 215 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms