RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 LYPD2Q6UXB3 125 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 FAM168AQ92567 244 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 SPTAN1Q13813 2472 aaKnown RBP15.8■□□□□ 0.12
FAM20B-201ENST00000263733 IL15RAQ13261 267 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 TRAV40A0A0B4J280 105 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 GGTLC3B5MD39 225 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 A0A1W2PRX2 142 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 TDGF1P13385 188 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 ZNF672Q499Z4 452 aaPredicted RBP15.8■□□□□ 0.12
FAM20B-201ENST00000263733 ERCC8Q13216 396 aa15.8■□□□□ 0.12
FAM20B-201ENST00000263733 M0R2P5 195 aa15.79■□□□□ 0.12
FAM20B-201ENST00000263733 YPEL3P61236 119 aaPredicted RBP15.79■□□□□ 0.12
FAM20B-201ENST00000263733 NPFFR1Q9GZQ6 430 aa15.79■□□□□ 0.12
FAM20B-201ENST00000263733 A0A1W2PPI3 338 aa15.79■□□□□ 0.12
FAM20B-201ENST00000263733 DLX4Q92988 240 aaPredicted RBP15.79■□□□□ 0.12
FAM20B-201ENST00000263733 COL6A6A6NMZ7 2263 aa15.78■□□□□ 0.12
FAM20B-201ENST00000263733 RCHY1Q96PM5 261 aa15.78■□□□□ 0.12
FAM20B-201ENST00000263733 OVOL1O14753 267 aa15.78■□□□□ 0.12
FAM20B-201ENST00000263733 THBDP07204 575 aa15.77■□□□□ 0.12
FAM20B-201ENST00000263733 SRSF6Q13247 344 aaKnown RBP15.77■□□□□ 0.12
FAM20B-201ENST00000263733 SRRM4A7MD48 611 aaKnown RBP15.77■□□□□ 0.12
FAM20B-201ENST00000263733 VDAC2P45880 294 aaPredicted RBP15.77■□□□□ 0.12
FAM20B-201ENST00000263733 ZNF876PQ49A33 203 aa15.77■□□□□ 0.12
FAM20B-201ENST00000263733 Q6ZVH6 145 aa15.77■□□□□ 0.12
FAM20B-201ENST00000263733 CSTL1Q9H114 145 aa15.77■□□□□ 0.11
FAM20B-201ENST00000263733 RBMY1BA6NDE4 496 aaKnown RBP15.77■□□□□ 0.11
FAM20B-201ENST00000263733 RBMY1EA6NEQ0 496 aaKnown RBP15.77■□□□□ 0.11
FAM20B-201ENST00000263733 RBMY1DP0C7P1 496 aaKnown RBP15.77■□□□□ 0.11
FAM20B-201ENST00000263733 RBMY1A1P0DJD3 496 aaKnown RBP15.77■□□□□ 0.11
FAM20B-201ENST00000263733 RBMY1CP0DJD4 496 aa15.77■□□□□ 0.11
FAM20B-201ENST00000263733 C8orf49Q96NF6 230 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 TMEM14BQ9NUH8 114 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 ZNF503-AS2A6NEH8 195 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 BUB1B-PAK6H3BSN5 160 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 LINC01559Q495D7 138 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 WDR86Q86TI4 376 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 MDS2Q8NDY4 140 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 YAE1D1Q9NRH1 226 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 FNDC10F2Z333 226 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 TNFRSF6BO95407 300 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 VMO1Q7Z5L0 202 aa15.76■□□□□ 0.11
FAM20B-201ENST00000263733 CD59P13987 128 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 C5orf64Q2M2E5 130 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 TRAV41A0A0B4J266 112 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 IGHV1-24A0A0C4DH33 117 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 TMEM238C9JI98 176 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 SPINK8P0C7L1 97 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.75■□□□□ 0.11
FAM20B-201ENST00000263733 LY6HO94772 140 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 CSRP1P21291 193 aaKnown RBP15.75■□□□□ 0.11
FAM20B-201ENST00000263733 GFRA4Q9GZZ7 299 aa15.75■□□□□ 0.11
FAM20B-201ENST00000263733 ATXN8Q156A1 80 aa15.74■□□□□ 0.11
FAM20B-201ENST00000263733 DPH3P1Q9H4G8 78 aa15.74■□□□□ 0.11
FAM20B-201ENST00000263733 DUX4L9Q6RFH8 374 aaPredicted RBP15.74■□□□□ 0.11
FAM20B-201ENST00000263733 UNQ6494/PRO21346Q6UXR6 183 aa15.74■□□□□ 0.11
FAM20B-201ENST00000263733 USF3Q68DE3 2245 aa15.74■□□□□ 0.11
FAM20B-201ENST00000263733 LYPD6BQ8NI32 183 aa15.74■□□□□ 0.11
FAM20B-201ENST00000263733 CREBBPQ92793 2442 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 VWC2Q2TAL6 325 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 LYPD1Q8N2G4 141 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 ZNF688P0C7X2 276 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 PLA2G2EQ9NZK7 142 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 A0A087WWL8 130 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 SHANK2-AS3Q9BTD1 123 aa15.73■□□□□ 0.11
FAM20B-201ENST00000263733 ETV2O00321 342 aaPredicted RBP15.72■□□□□ 0.11
FAM20B-201ENST00000263733 PROK2Q9HC23 129 aa15.72■□□□□ 0.11
FAM20B-201ENST00000263733 C2orf82Q6UX34 121 aa15.72■□□□□ 0.11
FAM20B-201ENST00000263733 FCN3O75636 299 aa15.72■□□□□ 0.11
FAM20B-201ENST00000263733 HTN3P15516 51 aa15.72■□□□□ 0.11
FAM20B-201ENST00000263733 KLF2Q9Y5W3 355 aaPredicted RBP15.72■□□□□ 0.11
FAM20B-201ENST00000263733 DUSP14O95147 198 aaKnown RBP15.71■□□□□ 0.11
FAM20B-201ENST00000263733 PF4P02776 101 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 SPACA3Q8IXA5 215 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 SPAG8Q99932 426 aaPredicted RBP15.71■□□□□ 0.11
FAM20B-201ENST00000263733 SMIM27A0A1W2PRY6 76 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 LMO1P25800 156 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 CFAP161Q6P656 301 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 TEX43Q6ZNM6 134 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 C11orf44Q8N8P7 122 aa15.71■□□□□ 0.11
FAM20B-201ENST00000263733 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.71■□□□□ 0.1
FAM20B-201ENST00000263733 C9JAW5 83 aa15.71■□□□□ 0.1
FAM20B-201ENST00000263733 Q6ZR03 302 aa15.71■□□□□ 0.1
FAM20B-201ENST00000263733 STHQ8IWL8 128 aa15.71■□□□□ 0.1
FAM20B-201ENST00000263733 K7EN84 100 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 CACNA1BQ00975 2339 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 ARFGEF3Q5TH69 2177 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 NDUFA4L2Q9NRX3 87 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 C11orf68Q9H3H3 251 aaKnown RBP15.7■□□□□ 0.1
FAM20B-201ENST00000263733 ZNF492Q9P255 531 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 FNDC1Q4ZHG4 1894 aaPredicted RBP15.7■□□□□ 0.1
FAM20B-201ENST00000263733 C9orf118A6NHY6 69 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 FAM104BQ5XKR9 115 aa15.7■□□□□ 0.1
FAM20B-201ENST00000263733 RNF166Q96A37 237 aaPredicted RBP15.7■□□□□ 0.1
FAM20B-201ENST00000263733 TRGV11A0A075B6L2 103 aa15.69■□□□□ 0.1
FAM20B-201ENST00000263733 ETDBQ3ZM63 59 aa15.69■□□□□ 0.1
FAM20B-201ENST00000263733 LINC00158P58513 81 aa15.69■□□□□ 0.1
FAM20B-201ENST00000263733 PCNX1Q96RV3 2341 aa15.69■□□□□ 0.1
FAM20B-201ENST00000263733 TSSC4Q9Y5U2 329 aaPredicted RBP15.69■□□□□ 0.1
FAM20B-201ENST00000263733 NLRC5Q86WI3 1866 aa15.69■□□□□ 0.1
FAM20B-201ENST00000263733 VCYO14598 125 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms