RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 FOSL1P15407 271 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 ZNF414Q96IQ9 312 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 NDFIP1Q9BT67 221 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
PDE4C-201ENST00000262805 IGF2RP11717 2491 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 hDV102S1A0JD36 115 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 CHCHD1Q96BP2 118 aaKnown RBP13.14□□□□□ -0.31
PDE4C-201ENST00000262805 DPM3Q9P2X0 92 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 IGHV3-23P01764 117 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 NDPQ00604 133 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 HES1Q14469 280 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
PDE4C-201ENST00000262805 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 CRXO43186 299 aaPredicted RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 PSG3Q16557 428 aa13.13□□□□□ -0.31
PDE4C-201ENST00000262805 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
PDE4C-201ENST00000262805 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
PDE4C-201ENST00000262805 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
PDE4C-201ENST00000262805 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
PDE4C-201ENST00000262805 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
PDE4C-201ENST00000262805 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 H0Y8G0 127 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 NDUFA3O95167 84 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 UCNP55089 124 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 UNQ5815/PRO19632Q6UWF5 114 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 CACNA1BQ00975 2339 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 NPBQ8NG41 125 aa13.12□□□□□ -0.31
PDE4C-201ENST00000262805 GNG7O60262 68 aa13.11□□□□□ -0.31
PDE4C-201ENST00000262805 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
PDE4C-201ENST00000262805 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
PDE4C-201ENST00000262805 PMCHL2Q9BQD1 86 aa13.11□□□□□ -0.31
PDE4C-201ENST00000262805 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
PDE4C-201ENST00000262805 IGLV11-55A0A075B6I3 123 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 CCL21O00585 134 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 ODF3BA8MYP8 253 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 NEU4Q8WWR8 484 aaPredicted RBP13.1□□□□□ -0.31
PDE4C-201ENST00000262805 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
PDE4C-201ENST00000262805 COL6A6A6NMZ7 2263 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 MUC21A0A0G2JKD1 596 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 MUC21A0A140T8X8 626 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 C20orf202A1L168 122 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 MUC21Q5SSG8 566 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
PDE4C-201ENST00000262805 SPTBN1Q01082 2364 aaKnown RBP13.09□□□□□ -0.31
PDE4C-201ENST00000262805 IGHV3OR16-8A0A075B7F1 116 aa13.08□□□□□ -0.31
PDE4C-201ENST00000262805 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.31
PDE4C-201ENST00000262805 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.31
PDE4C-201ENST00000262805 FAM106CPP0CH98 169 aa13.08□□□□□ -0.31
PDE4C-201ENST00000262805 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.31
PDE4C-201ENST00000262805 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.31
PDE4C-201ENST00000262805 LOC105371242A0A075B767 164 aa13.08□□□□□ -0.32
PDE4C-201ENST00000262805 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
PDE4C-201ENST00000262805 NCBP2LA6PVI3 153 aaKnown RBP13.08□□□□□ -0.32
PDE4C-201ENST00000262805 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
PDE4C-201ENST00000262805 IGFL4Q6B9Z1 124 aa13.08□□□□□ -0.32
PDE4C-201ENST00000262805 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 K7EQM0 130 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 TCF21O43680 179 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 RIGQ13278 110 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 RNF24Q9Y225 148 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 ZFHX3Q15911 3703 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 RAB1BQ9H0U4 201 aa13.07□□□□□ -0.32
PDE4C-201ENST00000262805 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 PRTN3P24158 256 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 CEACAM3P40198 252 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 MFAP4P55083 255 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 LOXL1Q08397 574 aaPredicted RBP13.06□□□□□ -0.32
PDE4C-201ENST00000262805 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
PDE4C-201ENST00000262805 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 SH2D1AO60880 128 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 NCR2O95944 276 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 Q8TAT8 98 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 MAP1LC3CQ9BXW4 147 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 C21orf62Q9NYP8 219 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 M0R1W7 72 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 CCL25O15444 150 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 MPV17L2Q567V2 206 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 C11orf71Q6IPW1 123 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms