RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ISLRO14498 428 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 OR7C2O60412 319 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 STAG3L2P0CL84 134 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 STAG3L3P0CL85 134 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 HIST1H1EP10412 219 aaKnown RBP12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 SNRPD3P62318 126 aaKnown RBP12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF726P1Q15940 193 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 LCN15Q6UWW0 184 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
CHCHD3-201ENST00000262570 H3BTX0 84 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 ID1P41134 155 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 PSMB3P49720 205 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 DEFB131AP59861 70 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 GUK1Q16774 197 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 RNF141Q8WVD5 230 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 FXYD5Q96DB9 178 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 TRBV19A0A075B6N1 114 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 OR10J4P0C629 311 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 NBEAP1P0C6P0 100 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 SSX7Q7RTT5 188 aa12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF331Q9NQX6 463 aaPredicted RBP12.35□□□□□ -0.43
CHCHD3-201ENST00000262570 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 SLC17A3O00476 420 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF253O75346 499 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 FHITP49789 147 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 PDE6HQ13956 83 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
CHCHD3-201ENST00000262570 A8MZ25 164 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 NDUFB4O95168 129 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 ZNF124Q15973 351 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 C20orf173Q96LM9 149 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 LINC00052Q96N35 136 aa12.33□□□□□ -0.44
CHCHD3-201ENST00000262570 UBE2L3P68036 154 aaKnown RBP12.32□□□□□ -0.44
CHCHD3-201ENST00000262570 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
CHCHD3-201ENST00000262570 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
CHCHD3-201ENST00000262570 CXorf1O96002 111 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 SULT1A2P50226 295 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 RAB5CP51148 216 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 MRAPQ8TCY5 172 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 SRD5A3Q9H8P0 318 aa12.31□□□□□ -0.44
CHCHD3-201ENST00000262570 HLA-DMBP28068 263 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 PSG9Q00887 426 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 CLEC5AQ9NY25 188 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 GCHFRP30047 84 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 PSG3Q16557 428 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 MBD3L1Q8WWY6 194 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CHCHD3-201ENST00000262570 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
CHCHD3-201ENST00000262570 LINC00322Q6ZN03 302 aaPredicted RBP12.29□□□□□ -0.44
CHCHD3-201ENST00000262570 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
CHCHD3-201ENST00000262570 PRKDCP78527 4128 aaKnown RBP12.29□□□□□ -0.44
CHCHD3-201ENST00000262570 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 FRMD6-AS1P0C7T7 363 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 DEFB1P60022 68 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
CHCHD3-201ENST00000262570 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 ZNF738Q8NE65 137 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 TMPRSS5Q9H3S3 457 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 SAV1Q9H4B6 383 aaPredicted RBP12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.44
CHCHD3-201ENST00000262570 ZNF705FA8MVS1 300 aaPredicted RBP12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 F6UB75 175 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 M0R3E3 92 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 HLA-DRB4P13762 266 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 ICAM4Q14773 271 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 368.1 ms