RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 C8orf49Q96NF6 230 aa12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-201ENST00000261789 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 CFHR4Q92496 578 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 DPM3Q9P2X0 92 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 PSG8Q9UQ74 426 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 ZFP30Q9Y2G7 519 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 SYS1-DBNDD2H3BUS1 97 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 HAX1O00165 279 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 GAGE1Q13065 139 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 COL6A6A6NMZ7 2263 aa12.87□□□□□ -0.35
TM9SF1-201ENST00000261789 TMSB15BA0A087X1C1 80 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 K7ENP7 123 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 UNQ5815/PRO19632Q6UWF5 114 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 A0A1B0GUT8 65 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 GNG7O60262 68 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-201ENST00000261789 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 FAM231BA6NCW3 169 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 NDPQ00604 133 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 PSG3Q16557 428 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 RNF5Q99942 180 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 TMEM75Q8N9X5 138 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 FANCD2OSQ96PS1 177 aa12.85□□□□□ -0.35
TM9SF1-201ENST00000261789 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 CCL21O00585 134 aa12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 IGHV3-35A0A0C4DH35 117 aa12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 AKAP6Q13023 2319 aa12.84□□□□□ -0.35
TM9SF1-201ENST00000261789 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 F8W735 103 aaPredicted RBP12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 TCF21O43680 179 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 OR11H6Q8NGC7 330 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 WI2-2373I1.2A0A1W2PRP0 233 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 FAM106CPP0CH98 169 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 MSRB2Q9Y3D2 182 aa12.83□□□□□ -0.36
TM9SF1-201ENST00000261789 K7EQM0 130 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 NDUFA3O95167 84 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 FAM162BQ5T6X4 162 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 NEU4Q8WWR8 484 aaPredicted RBP12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 SRSF8Q9BRL6 282 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 C1RLQ9NZP8 487 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 IGKV2-40A0A087WW87 121 aaPredicted RBP12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 IGKV2D-40P01614 121 aaPredicted RBP12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 NPBQ8NG41 125 aa12.82□□□□□ -0.36
TM9SF1-201ENST00000261789 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 ERASQ7Z444 233 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 SERTM2A0A1B0GWG4 89 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 TMEM213A2RRL7 107 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 RIGQ13278 110 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
TM9SF1-201ENST00000261789 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 LOC389332A0A1B0GUA5 103 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 C20orf202A1L168 122 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 ARPC1AQ92747 370 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 CEACAM3P40198 252 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 MFAP4P55083 255 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 FXYD7P58549 80 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 LYPD1Q8N2G4 141 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 Q8TAT8 98 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 RNF24Q9Y225 148 aa12.8□□□□□ -0.36
TM9SF1-201ENST00000261789 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 SFTPCP11686 197 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 C21orf62Q9NYP8 219 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 CCL25O15444 150 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 PRTN3P24158 256 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 IFI27P40305 119 aaPredicted RBP12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 ZNF562Q6V9R5 426 aa12.79□□□□□ -0.36
TM9SF1-201ENST00000261789 SPTBN4Q9H254 2564 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 NCR2O95944 276 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 ADORA2A-AS1P86434 159 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms