RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 C19orf71A6NCJ1 209 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 IL4P05112 153 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 BRS3P32247 399 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 LINC00322Q6ZN03 302 aaPredicted RBP13.75□□□□□ -0.21
SSB-201ENST00000260956 Q86TA4 180 aa13.75□□□□□ -0.21
SSB-201ENST00000260956 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 GNG7O60262 68 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
SSB-201ENST00000260956 IER3P46695 156 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 C16orf54Q6UWD8 224 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
SSB-201ENST00000260956 GRAMD2BQ96HH9 432 aa13.74□□□□□ -0.21
SSB-201ENST00000260956 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 NUPR1O60356 82 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 OR2J3O76001 311 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 CTSGP08311 255 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 ESDP10768 282 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 TCL1AP56279 114 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 BPIFA4PQ86YQ2 179 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 VN1R17PQ8TDU5 208 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 C17orf77Q96MU5 243 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 TXN2Q99757 166 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 PRDM13Q9H4Q3 707 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 ZNF705GA8MUZ8 300 aaPredicted RBP13.73□□□□□ -0.21
SSB-201ENST00000260956 ATP6V0E1O15342 81 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 CRLF1O75462 422 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 MT-ND6P03923 174 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 UBE2G1P62253 170 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 COX19Q49B96 90 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 EXOC3-AS1Q8N2X6 119 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 C5orf56Q8N8D9 126 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 ZNF502Q8TBZ5 544 aa13.73□□□□□ -0.21
SSB-201ENST00000260956 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
SSB-201ENST00000260956 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 SNURFLB1AK76 121 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 NPIPB6E9PJ23 425 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 GATCO43716 136 aaKnown RBP13.72□□□□□ -0.21
SSB-201ENST00000260956 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 CRIP2P52943 208 aaPredicted RBP13.72□□□□□ -0.21
SSB-201ENST00000260956 JOSD1Q15040 202 aaPredicted RBP13.72□□□□□ -0.21
SSB-201ENST00000260956 LYPD1Q8N2G4 141 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 CHRDL1Q9BU40 450 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 TMEM160Q9NX00 188 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 ATRQ13535 2644 aa13.72□□□□□ -0.21
SSB-201ENST00000260956 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 AMY1AP04745 511 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 CT83Q5H943 113 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 WDR73Q6P4I2 378 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 TSKUQ8WUA8 353 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 THYN1Q9P016 225 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 FBXL7Q9UJT9 491 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 RNF24Q9Y225 148 aa13.71□□□□□ -0.21
SSB-201ENST00000260956 A0A1B0GXF2 115 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 LINC01548A6NM66 108 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 Q0VG73 95 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 Q56UQ5 140 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 RASL11AQ6T310 242 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 OR5R1Q8NH85 324 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 TRAV8-1A0A0A6YYK1 113 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 SLC35B1P78383 322 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 PDE6HQ13956 83 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 RPH3ALQ9UNE2 315 aa13.7□□□□□ -0.22
SSB-201ENST00000260956 BMPR1BO00238 502 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 IGHV3-23P01764 117 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 GZMBP10144 247 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 CTAG1AP78358 180 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 TMEM75Q8N9X5 138 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 MEGF9Q9H1U4 602 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 SERTAD4Q9NUC0 356 aa13.69□□□□□ -0.22
SSB-201ENST00000260956 OR2T8A6NH00 312 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 F2Z2F3 143 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 HLA-DQA1P01909 254 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
SSB-201ENST00000260956 UNQ5815/PRO19632Q6UWF5 114 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 GOLT1AQ6ZVE7 132 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 CCDC140Q96MF4 163 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 NEU1Q99519 415 aa13.68□□□□□ -0.22
SSB-201ENST00000260956 RPP21Q9H633 154 aaKnown RBP13.68□□□□□ -0.22
SSB-201ENST00000260956 SPINK4O60575 86 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 GATA3P23771 443 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 PRR27Q6MZM9 219 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 TMEM18Q96B42 140 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
SSB-201ENST00000260956 G3V318 75 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 FSHBP01225 129 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 CRISP2P16562 243 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 RHOGP84095 191 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 C15orf32Q32M92 178 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 PRIMA1Q86XR5 153 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms