RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 RITA1Q96K30 269 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 HSPB9Q9BQS6 159 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 SRSF8Q9BRL6 282 aaKnown RBP5.05□□□□□ -1.6
BRIP1-201ENST00000259008 RANBP2P49792 3224 aaKnown RBP5.05□□□□□ -1.6
BRIP1-201ENST00000259008 IFITM10A6NMD0 228 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 NDUFA3O95167 84 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 KRTAP10-9P60411 292 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 RPP25LQ8N5L8 163 aaKnown RBP5.05□□□□□ -1.6
BRIP1-201ENST00000259008 OR11H6Q8NGC7 330 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 FOXC2Q99958 501 aa5.05□□□□□ -1.6
BRIP1-201ENST00000259008 HIGD1CA8MV81 97 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 F8W735 103 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 CKS1BP61024 79 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 TMEM136Q6ZRR5 245 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 GGTLC1Q9BX51 225 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 LHBP01229 141 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 HLA-DQA1P01909 254 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 ZNF876PQ49A33 203 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 LINC00311Q8N616 119 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 VCX2Q9H322 139 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 CHD7Q9P2D1 2997 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 A0A0G2JRQ6 117 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 FBLL1A6NHQ2 334 aaKnown RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 LDLRAD4O15165 306 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 APOHP02749 345 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 SNRPEP62304 92 aaKnown RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 IQCJQ1A5X6 159 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 C22orf34Q6ZV56 151 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 SSBP4Q9BWG4 385 aaPredicted RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 ESM1Q9NQ30 184 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 SH2D1AO60880 128 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 CDSNQ15517 529 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 VAMP3Q15836 100 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 PRSS57Q6UWY2 283 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
BRIP1-201ENST00000259008 NDUFA4L2Q9NRX3 87 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 A0A0U1RRA0 63 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
BRIP1-201ENST00000259008 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 IGLL1P15814 213 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 TTC9CQ8N5M4 171 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 OR10AG1Q8NH19 301 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 Q9HAA7 133 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 WFDC1Q9HC57 220 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 HEATR5AQ86XA9 2040 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 PGPEP1LA6NFU8 196 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 CBLN1P23435 193 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C11orf91Q3C1V1 193 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C14orf178Q8N769 122 aaPredicted RBP5.03□□□□□ -1.6
BRIP1-201ENST00000259008 Q8NFD4 153 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 NCKAP5O14513 1909 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 TRAV8-1A0A0A6YYK1 113 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 ID3Q02535 119 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 SHISA2Q6UWI4 295 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C5orf56Q8N8D9 126 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C4orf3Q8WVX3 66 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 BBC3Q96PG8 261 aaPredicted RBP5.03□□□□□ -1.6
BRIP1-201ENST00000259008 KLK5Q9Y337 293 aaPredicted RBP5.03□□□□□ -1.6
BRIP1-201ENST00000259008 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 ITGB1BP1O14713 200 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 ATP5LO75964 103 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 AMBPP02760 352 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 PRB2P02812 416 aaPredicted RBP5.03□□□□□ -1.6
BRIP1-201ENST00000259008 DEFB135Q30KP9 77 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 SHANK2-AS3Q9BTD1 123 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 IGLL5B9A064 214 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 NMSQ5H8A3 153 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 Q8N7P7 452 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 OR5A1Q8NGJ0 315 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C1orf159Q96HA4 380 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 C8orf49Q96NF6 230 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 MS4A6AQ9H2W1 248 aa5.03□□□□□ -1.6
BRIP1-201ENST00000259008 SPTBN1Q01082 2364 aaKnown RBP5.03□□□□□ -1.6
BRIP1-201ENST00000259008 CIDEAO60543 219 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 TCRAP04437 139 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 MYCNOSP40205 109 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 IMMP2LQ96T52 175 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 WDR83OSQ9Y284 106 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 KIAA2026Q5HYC2 2103 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 TRANK1O15050 2925 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 IGHV3-38A0A0C4DH36 116 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 C15orf62A8K5M9 175 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 H3BUA1 57 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 SDHCQ99643 169 aaPredicted RBP5.02□□□□□ -1.61
BRIP1-201ENST00000259008 NBASA2RRP1 2371 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 F6UB75 175 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 MT-ND6P03923 174 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 NDUFA11Q86Y39 141 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 SIRPDQ9H106 197 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 PRO1933Q9H354 126 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 TMEM14BQ9NUH8 114 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 PKDREJQ9NTG1 2253 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 PAX4O43316 350 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 NCR2O95944 276 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 VWC2Q2TAL6 325 aa5.02□□□□□ -1.61
BRIP1-201ENST00000259008 CD300EQ496F6 205 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms