RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 PPIAL4FP0DN26 164 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 ATP6V0BQ99437 205 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 PROCRQ9UNN8 238 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 ZNF207O43670 478 aaKnown RBP9.12□□□□□ -0.95
TROAP-201ENST00000257909 CRIP1P50238 77 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 FXYD2P54710 66 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 LPAL2Q16609 132 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 TEX36Q5VZQ5 186 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 Q71RC1 249 aaPredicted RBP9.12□□□□□ -0.95
TROAP-201ENST00000257909 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
TROAP-201ENST00000257909 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
TROAP-201ENST00000257909 TRBV19A0A075B6N1 114 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 M0R1B8 84 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 THBDP07204 575 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 TM4SF20Q53R12 229 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 C8orf31Q8N9H6 132 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 TSSC4Q9Y5U2 329 aaPredicted RBP9.11□□□□□ -0.95
TROAP-201ENST00000257909 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 RPL27AP46776 148 aaKnown RBP9.11□□□□□ -0.95
TROAP-201ENST00000257909 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
TROAP-201ENST00000257909 LINC00311Q8N616 119 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 PHLDA1Q8WV24 401 aaPredicted RBP9.11□□□□□ -0.95
TROAP-201ENST00000257909 CHAC1Q9BUX1 264 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 NGBQ9NPG2 151 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 TPSG1Q9NRR2 321 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 ARFGEF3Q5TH69 2177 aa9.11□□□□□ -0.95
TROAP-201ENST00000257909 CKS2P33552 79 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 MRGPRG-AS1Q2M3A8 158 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 TM2D2Q9BX73 214 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 ZMAT4Q9H898 229 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 SPANXB1Q9NS25 103 aaPredicted RBP9.1□□□□□ -0.95
TROAP-201ENST00000257909 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 VSTM5A8MXK1 200 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 K7EM74 188 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 IGHV1-46P01743 117 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 CCL3L1P16619 93 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 FXYD7P58549 80 aa9.1□□□□□ -0.95
TROAP-201ENST00000257909 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.95
TROAP-201ENST00000257909 INTS1Q8N201 2190 aaKnown RBP9.1□□□□□ -0.95
TROAP-201ENST00000257909 IGHV3-21A0A0B4J1V1 117 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 WI2-2373I1.2A0A1W2PRP0 233 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 E9PLD3 99 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 DIAPH2-AS1Q14236 149 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 C3orf36Q3SXR2 165 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 SIGLEC15Q6ZMC9 328 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 CEND1Q8N111 149 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 RASL11BQ9BPW5 248 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 HLA-DRB4X5D2U9 266 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 A0A1W2PRD5 423 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 A0A1W2PRF3 423 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 A0A1W2PRM7 423 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 RITA1Q96K30 269 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 HHLA3Q9XRX5 114 aa9.09□□□□□ -0.95
TROAP-201ENST00000257909 NPYP01303 97 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 EVI2AP22794 236 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 CCL11P51671 97 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 SHANK2-AS3Q9BTD1 123 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 TMEM133Q9H2Q1 129 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
TROAP-201ENST00000257909 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 TRBV25-1A0A075B6N4 114 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 LINC01546A6NGU7 62 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 K7ERJ3 54 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 ODF1Q14990 250 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 ATP1A1-AS1Q5TC04 95 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 ZNF562Q6V9R5 426 aa9.08□□□□□ -0.96
TROAP-201ENST00000257909 H3BRN7 92 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 ENSAO43768 121 aaKnown RBP9.07□□□□□ -0.96
TROAP-201ENST00000257909 IGKCP01834 107 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 WFDC2Q14508 124 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 PLGLAQ15195 96 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 TAL2Q16559 108 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 TCTEX1D4Q5JR98 221 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 ASPMQ8IZT6 3477 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 CADP27708 2225 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 IGLL5B9A064 214 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 FCER1GP30273 86 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 CCDC144NLQ6NUI1 221 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 C17orf77Q96MU5 243 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 ASCL2Q99929 193 aa9.07□□□□□ -0.96
TROAP-201ENST00000257909 SH2D1AO60880 128 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 RBP4P02753 201 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 APELAP0DMC3 54 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 ZNF502Q8TBZ5 544 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 GPR179Q6PRD1 2367 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms