RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 MRPL36Q9P0J6 103 aaKnown RBP12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 CIDEAO60543 219 aa12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 IGLC1P0CG04 106 aa12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 DLX1P56177 255 aa12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
SLC6A8-201ENST00000253122 LOC107984156A0A0G2JMH3 177 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 H3BRM9 83 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 ARL17AQ8IVW1 177 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 OR9G4Q8NGQ1 327 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 NGBQ9NPG2 151 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 ZNF71Q9NQZ8 489 aaPredicted RBP12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 LEPP41159 167 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 PSG3Q16557 428 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 NBL1P41271 181 aa12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 MEF2CQ06413 473 aaPredicted RBP12.75□□□□□ -0.37
SLC6A8-201ENST00000253122 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 NPIPB5A8MRT5 1133 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 TGFAP01135 160 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 IGHV3-23P01764 117 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 RHOGP84095 191 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 IGKV3-7A0A075B6H7 116 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 IGHV3OR16-13A0A075B7E8 117 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 IGHV3-74A0A0B4J1X5 117 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 WISP2O76076 250 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 TNRC6AQ8NDV7 1962 aaKnown RBP12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 TMEM200BQ69YZ2 307 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 MBD6Q96DN6 1003 aa12.74□□□□□ -0.37
SLC6A8-201ENST00000253122 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 VWC2LB2RUY7 222 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 A0A1B0GV72 72 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 K7EP34 96 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 SLC25A15Q9Y619 301 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 CT83Q5H943 113 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 TRGV9Q99603 122 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 ZNF492Q9P255 531 aa12.73□□□□□ -0.37
SLC6A8-201ENST00000253122 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 NEU4Q8WWR8 484 aaPredicted RBP12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 CSPG4Q6UVK1 2322 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 K7ERJ3 54 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 CLEC2AQ6UVW9 174 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
SLC6A8-201ENST00000253122 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 BMI1P35226 326 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 LINC01545Q5VT33 79 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 Q6AWC8 147 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 Q8TAT8 98 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 A0A1B0GW15 77 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 A0A1B0GXF2 115 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 H3BVH4 76 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 K7EMI3 77 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 HAX1O00165 279 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 CNTFRP26992 372 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 FAM120AOSQ5T036 256 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 FAM169BQ8N8A8 192 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 TTTY13Q9BZ97 58 aa12.71□□□□□ -0.37
SLC6A8-201ENST00000253122 CD40P25942 277 aa12.71□□□□□ -0.38
SLC6A8-201ENST00000253122 SRSF6Q13247 344 aaKnown RBP12.71□□□□□ -0.38
SLC6A8-201ENST00000253122 NDUFA3O95167 84 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 MSMPQ1L6U9 139 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 TTC9CQ8N5M4 171 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 ZNF479Q96JC4 524 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 PLSCR4Q9NRQ2 329 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 DKK2Q9UBU2 259 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 A0A1W2PPM0 123 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 PRRG2O14669 202 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 LTAP01374 205 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 CLEC3BP05452 202 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 FAM106CPP0CH98 169 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 FAM106AQ4KMX7 169 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 SPANXN1Q5VSR9 72 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 RNF125Q96EQ8 232 aa12.7□□□□□ -0.38
SLC6A8-201ENST00000253122 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms