RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PSG8Q9UQ74 426 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 OR2T8A6NH00 312 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 APOHP02749 345 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 OR4B1Q8NGF8 309 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 IGHV2-70DA0A0C4DH43 119 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 HSBP1O75506 76 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 FOXA3P55318 350 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 RNASEKQ6P5S7 137 aaKnown RBP15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 ZNF705AQ6ZN79 300 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 MIEN1Q9BRT3 115 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 ZFP30Q9Y2G7 519 aa15.28■□□□□ 0.04
CDC42EP1-201ENST00000249014 CRIP1P50238 77 aa15.27■□□□□ 0.04
CDC42EP1-201ENST00000249014 CTSGP08311 255 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 RAB4AP20338 218 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 UQCRFS1P47985 274 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 EFNA4P52798 201 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 BORCS7Q96B45 105 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 THYN1Q9P016 225 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 K7EQM0 130 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 ITLN2Q8WWU7 325 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 TMEM190Q8WZ59 177 aa15.26■□□□□ 0.03
CDC42EP1-201ENST00000249014 C19orf84I3L1E1 186 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 M0QZ24 198 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 M0R143 59 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 CTRLP40313 264 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 PDE6HQ13956 83 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 BPESC1Q9GZL8 116 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 FAM181BA6NEQ2 426 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 M0R2Z0 102 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 FAM106CPP0CH98 169 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 UBE2E1P51965 193 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 AKAP6Q13023 2319 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 C8orf49Q96NF6 230 aa15.25■□□□□ 0.03
CDC42EP1-201ENST00000249014 SH2D7A6NKC9 451 aaPredicted RBP15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 HAX1O00165 279 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 LMO4P61968 165 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 LCN12Q6JVE5 192 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 EBLN2Q6P2I7 272 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 S100A7AQ86SG5 101 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 C1RLQ9NZP8 487 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 SAA4P35542 130 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 AAMDCQ9H7C9 122 aa15.24■□□□□ 0.03
CDC42EP1-201ENST00000249014 LOC102724200A0A096LPH7 203 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP1-201ENST00000249014 PRORYQ9H606 182 aa15.23■□□□□ 0.03
CDC42EP1-201ENST00000249014 IGHV3OR16-8A0A075B7F1 116 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 CHEK1O14757 476 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 ARMS2P0C7Q2 107 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 SPATA45Q537H7 98 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 IGHV3-35A0A0C4DH35 117 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 NUTF2P61970 127 aaKnown RBP15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 PMCHL1Q16048 86 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 TMUB1Q9BVT8 246 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 ZFHX3Q15911 3703 aa15.22■□□□□ 0.03
CDC42EP1-201ENST00000249014 C2orf70A6NJV1 201 aa15.21■□□□□ 0.03
CDC42EP1-201ENST00000249014 ATOH7Q8N100 152 aa15.21■□□□□ 0.03
CDC42EP1-201ENST00000249014 SMAD5-AS1Q9Y6J3 95 aa15.21■□□□□ 0.03
CDC42EP1-201ENST00000249014 A0A1B0GUT8 65 aa15.21■□□□□ 0.02
CDC42EP1-201ENST00000249014 ATP6V0E1O15342 81 aa15.21■□□□□ 0.02
CDC42EP1-201ENST00000249014 ECSCRQ19T08 205 aa15.21■□□□□ 0.02
CDC42EP1-201ENST00000249014 NDFIP1Q9BT67 221 aa15.21■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGKV2-40A0A087WW87 121 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGKV2D-40P01614 121 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 RPL7P18124 248 aaKnown RBP15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 GNLYP22749 145 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 PSG9Q00887 426 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 C15orf32Q32M92 178 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 UNQ5815/PRO19632Q6UWF5 114 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 FAM110DQ8TAY7 271 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 TXN2Q99757 166 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
CDC42EP1-201ENST00000249014 MAJINQ3KP22 176 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 CLEC5AQ9NY25 188 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 LINC01548A6NM66 108 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 SFTPCP11686 197 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 BTF3P20290 206 aaKnown RBP15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 GPR183P32249 361 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 CSN1S1P47710 185 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGFL4Q6B9Z1 124 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 LPAR2Q9HBW0 351 aa15.19■□□□□ 0.02
CDC42EP1-201ENST00000249014 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 ZNF502Q8TBZ5 544 aa15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 CACNA1BQ00975 2339 aa15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGHV1-24A0A0C4DH33 117 aa15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGHG4P01861 327 aa15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 CHCHD1Q96BP2 118 aaKnown RBP15.18■□□□□ 0.02
CDC42EP1-201ENST00000249014 CT45A10P0DMU9 189 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 HLA-DMBP28068 263 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 ZNF138P52744 262 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 RHOGP84095 191 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 FAM162BQ5T6X4 162 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 TPPP3Q9BW30 176 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 SERTM2A0A1B0GWG4 89 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 G3V318 75 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 SCGB2A1O75556 95 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 LINC00614P0C842 121 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 SSTP61278 116 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 RIGQ13278 110 aa15.17■□□□□ 0.02
CDC42EP1-201ENST00000249014 VPS13CQ709C8 3753 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms