RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TMEM88Q6PEY1 159 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 C2CD4CQ8TF44 421 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 SMCO4Q9NRQ5 59 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 U3KQE9 123 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 APOHP02749 345 aaPredicted RBP14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 GNG4P50150 75 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 EXOC3-AS1Q8N2X6 119 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 ATG101Q9BSB4 218 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 DAZ1Q9NQZ3 744 aaKnown RBP14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 UFC1Q9Y3C8 167 aa14.36□□□□□ -0.11
TNFSF9-201ENST00000245817 C9JCJ5 164 aa14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 CDX1P47902 265 aaPredicted RBP14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 MEOX2P50222 304 aa14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 TAS2R60P59551 318 aa14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 UBE2G1P62253 170 aa14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 GNG5P63218 68 aa14.35□□□□□ -0.11
TNFSF9-201ENST00000245817 NIPBLQ6KC79 2804 aaeCLIP14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 A0A087WWC5 75 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 K7EMT4 169 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 TCF21O43680 179 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 BMI1P35226 326 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 CSN1S1P47710 185 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 SIGLEC15Q6ZMC9 328 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 CBLN2Q8IUK8 224 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
TNFSF9-201ENST00000245817 DNASE2O00115 360 aaPredicted RBP14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 SLC17A3O00476 420 aa14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 ZNF253O75346 499 aa14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 S100A9P06702 114 aaKnown RBP14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 C16orf54Q6UWD8 224 aa14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 LINC01551Q86U37 167 aa14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 LY96Q9Y6Y9 160 aa14.33□□□□□ -0.11
TNFSF9-201ENST00000245817 A0A087X0K7 114 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 K7EQM0 130 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 TCRAP04437 139 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 TM4SF20Q53R12 229 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 CENPWQ5EE01 88 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 LINC01006Q8NI28 216 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 C4orf3Q8WVX3 66 aa14.33□□□□□ -0.12
TNFSF9-201ENST00000245817 IGHV4OR15-8A0A075B7B6 117 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 A0A087WW49 117 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 IGHV7-4-1A0A0J9YVY3 117 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 NDUFA7O95182 113 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 OCC1Q8TAD7 63 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 DPF1Q92782 380 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 CTDSP1Q9GZU7 261 aa14.32□□□□□ -0.12
TNFSF9-201ENST00000245817 TRBV20OR9-2A0A075B6H5 130 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 PGPEP1LA6NFU8 196 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 TMEM183BQ1AE95 376 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 RNF212Q495C1 297 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 GLMPQ8WWB7 406 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 WFDC12Q8WWY7 111 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 FMC1Q96HJ9 113 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 LINC00479Q96M42 142 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 SLC50A1Q9BRV3 221 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 AURKAIP1Q9NWT8 199 aaPredicted RBP14.31□□□□□ -0.12
TNFSF9-201ENST00000245817 TRAV34A0A0B4J273 112 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 HAX1O00165 279 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 TSPAN4O14817 238 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 HOXD3P31249 432 aaPredicted RBP14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 TCTEX1D4Q5JR98 221 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 BAGE2Q86Y30 109 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 ANAPC16Q96DE5 110 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 LINC01619G3V211 115 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 RPL11P62913 178 aaKnown RBP14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 GOLT1AQ6ZVE7 132 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 REC114Q7Z4M0 266 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 LURAP1LQ8IV03 231 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 TUBA4BQ9H853 241 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 ZNF331Q9NQX6 463 aaPredicted RBP14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 TMEM242Q9NWH2 141 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 SMPXQ9UHP9 88 aa14.3□□□□□ -0.12
TNFSF9-201ENST00000245817 LGALS9O00182 355 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 ISLRO14498 428 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 SYNJ2BPP57105 145 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 C1QL4Q86Z23 238 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 OR11H1Q8NG94 326 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 RNF114Q9Y508 228 aa14.29□□□□□ -0.12
TNFSF9-201ENST00000245817 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 CXorf65A6NEN9 183 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 CHEK1O14757 476 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 PPP1R2P9O14990 202 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 MGST1P10620 155 aaKnown RBP14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 C18orf65Q6ZTR6 163 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 ARL6IP6Q8N6S5 226 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 OR1N2Q8NGR9 330 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 IGF2BP2-AS1Q96M15 143 aa14.28□□□□□ -0.12
TNFSF9-201ENST00000245817 DIRC3C9JPN6 131 aa14.27□□□□□ -0.12
TNFSF9-201ENST00000245817 H7BYZ3 331 aa14.27□□□□□ -0.12
TNFSF9-201ENST00000245817 WIPF2Q8TF74 440 aaPredicted RBP14.27□□□□□ -0.12
TNFSF9-201ENST00000245817 SFRP2Q96HF1 295 aa14.27□□□□□ -0.12
TNFSF9-201ENST00000245817 CLEC5AQ9NY25 188 aa14.27□□□□□ -0.12
TNFSF9-201ENST00000245817 SETD2Q9BYW2 2564 aaPredicted RBP14.27□□□□□ -0.13
TNFSF9-201ENST00000245817 M0R3E3 92 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms