RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 CHEK1O14757 476 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 IGLL1P15814 213 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 LY6DQ14210 128 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 SPATA12Q7Z6I5 190 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 NPBQ8NG41 125 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 ATRXP46100 2492 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 APOHP02749 345 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 CEACAM3P40198 252 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 FAM120AOSQ5T036 256 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 LOC102724200A0A096LPH7 203 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 OVOL3O00110 214 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 MRPS12O15235 138 aaKnown RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
HIF3A-202ENST00000244303 TIMD4Q96H15 378 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
HIF3A-202ENST00000244303 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 HAX1O00165 279 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 GNG7O60262 68 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 SPTBN4Q9H254 2564 aa11.31□□□□□ -0.6
HIF3A-202ENST00000244303 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 M0R3E3 92 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 PSG3Q16557 428 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 LYPD1Q8N2G4 141 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
HIF3A-202ENST00000244303 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 NDFIP1Q9BT67 221 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 K7EQM0 130 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 M0R1W7 72 aa11.3□□□□□ -0.6
HIF3A-202ENST00000244303 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-202ENST00000244303 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 PRTN3P24158 256 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 LINC00173Q6ZV60 143 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 SVEP1Q4LDE5 3571 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
HIF3A-202ENST00000244303 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 OR4C46A6NHA9 309 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 CRIP1P50238 77 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 ZNF138P52744 262 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 NDPQ00604 133 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 VAMP3Q15836 100 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 PRORYQ9H606 182 aa11.29□□□□□ -0.6
HIF3A-202ENST00000244303 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 NPIPB5A8MRT5 1133 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-202ENST00000244303 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
HIF3A-202ENST00000244303 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 MFAP4P55083 255 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 C8orf49Q96NF6 230 aa11.28□□□□□ -0.6
HIF3A-202ENST00000244303 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-202ENST00000244303 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
HIF3A-202ENST00000244303 WNK2Q9Y3S1 2297 aa11.27□□□□□ -0.61
HIF3A-202ENST00000244303 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 RBX1P62877 108 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 ERASQ7Z444 233 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 VMO1Q7Z5L0 202 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 DTX2Q86UW9 622 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 AAMDCQ9H7C9 122 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 A0A1W2PPR1 153 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 CSN3P07498 182 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 RIGQ13278 110 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 PDE6HQ13956 83 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 RNF151Q2KHN1 245 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 TTC9CQ8N5M4 171 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-202ENST00000244303 TPPP3Q9BW30 176 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 TP73-AS1Q9UF72 201 aa11.26□□□□□ -0.61
HIF3A-202ENST00000244303 IGHV2-70DA0A0C4DH43 119 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 K7EP13 123 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 H0Y8G0 127 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
HIF3A-202ENST00000244303 ASH1LQ9NR48 2969 aaKnown RBP11.25□□□□□ -0.61
HIF3A-202ENST00000244303 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms