RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 A8MWL6 223 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF253O75346 499 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 NDUFA3O95167 84 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 LTAP01374 205 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 FRMD6-AS1P0C7T7 363 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF705DP0CH99 300 aaPredicted RBP6.17□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF705BP0CI00 300 aaPredicted RBP6.17□□□□□ -1.42
CXCR4-201ENST00000241393 CNTFRP26992 372 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 HTR1DP28221 377 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 TCL1AP56279 114 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 CYB5R2Q6BCY4 276 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 MRPL54Q6P161 138 aaKnown RBP6.17□□□□□ -1.42
CXCR4-201ENST00000241393 C19orf35Q6ZS72 473 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 NPBQ8NG41 125 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 LINC01560Q8TB33 94 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 DPM3Q9P2X0 92 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 SPTBN2O15020 2390 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 ZFHX4Q86UP3 3567 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 A0A1B0GXF2 115 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 C19orf71A6NCJ1 209 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 OOSP1A8MZH6 123 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF324O75467 553 aaPredicted RBP6.16□□□□□ -1.42
CXCR4-201ENST00000241393 TCRAP04437 139 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 COX7A1P24310 79 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 SRIP30626 198 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 AMTP48728 403 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 MMDQ15546 238 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 TOMM20LQ6UXN7 152 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF600Q6ZNG1 722 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF575Q86XF7 245 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF48Q96MX3 618 aaPredicted RBP6.16□□□□□ -1.42
CXCR4-201ENST00000241393 RASL11BQ9BPW5 248 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 Q9H3A6 140 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 FBXL15Q9H469 300 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 RPP21Q9H633 154 aaKnown RBP6.16□□□□□ -1.42
CXCR4-201ENST00000241393 CBLN4Q9NTU7 201 aa6.16□□□□□ -1.42
CXCR4-201ENST00000241393 AKAP13Q12802 2813 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 SPENQ96T58 3664 aaKnown RBP6.15□□□□□ -1.42
CXCR4-201ENST00000241393 TRAV30A0A087WSZ9 112 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 A0A1W2PS18 150 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 ODF3BA8MYP8 253 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 M0QZK8 103 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 M0R143 59 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 TIMM23O14925 209 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 NBR2O15453 112 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 SPINK4O60575 86 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 PRTN3P24158 256 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 GNG5P63218 68 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 KLRB1Q12918 225 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 PLGLAQ15195 96 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 Q6ZSV7 163 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 KIR3DL3Q8N743 410 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 NHLRC2Q8NBF2 726 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 C18orf32Q8TCD1 76 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 BLNKQ8WV28 456 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 SHANK2-AS3Q9BTD1 123 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 SLC25A39Q9BZJ4 359 aaPredicted RBP6.15□□□□□ -1.42
CXCR4-201ENST00000241393 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 ONECUT1Q9UBC0 465 aa6.15□□□□□ -1.42
CXCR4-201ENST00000241393 TBL2Q9Y4P3 447 aaKnown RBP6.15□□□□□ -1.42
CXCR4-201ENST00000241393 CFAP47Q6ZTR5 3102 aa6.15□□□□□ -1.43
CXCR4-201ENST00000241393 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 HIGD1CA8MV81 97 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 F2Z2F3 143 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 K7EIM0 57 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 CCL21O00585 134 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
CXCR4-201ENST00000241393 IGKV1-17P01599 117 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 RAB4AP20338 218 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
CXCR4-201ENST00000241393 LYZP61626 148 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 HBBP68871 147 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 SLC35B1P78383 322 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 SLAQ13239 276 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 RUSC1-AS1Q66K80 236 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 C11orf71Q6IPW1 123 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 BPIFA4PQ86YQ2 179 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 ARL6IP6Q8N6S5 226 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 MIEN1Q9BRT3 115 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 VAMP8Q9BV40 100 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 MGAQ8IWI9 3026 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 PTPRQQ9UMZ3 2332 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 ANKHD1Q8IWZ3 2542 aaKnown RBP6.14□□□□□ -1.43
CXCR4-201ENST00000241393 LOC105371242A0A075B767 164 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 H3BRN7 92 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 CNIH1O95406 144 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 P01737 135 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 KIAA1644Q3SXP7 199 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 MINOS1Q5TGZ0 78 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
CXCR4-201ENST00000241393 C16orf54Q6UWD8 224 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms