RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RSPO3Q9BXY4 272 aaPredicted RBP10.82□□□□□ -0.68
NEK4-201ENST00000233027 CSRP1P21291 193 aaKnown RBP10.81□□□□□ -0.68
NEK4-201ENST00000233027 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 ZNF524Q96C55 264 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
NEK4-201ENST00000233027 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 MED12Q93074 2177 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
NEK4-201ENST00000233027 PRSS57Q6UWY2 283 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 LYPD1Q8N2G4 141 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 PHF3Q92576 2039 aaKnown RBP10.81□□□□□ -0.68
NEK4-201ENST00000233027 C1orf159Q96HA4 380 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 M0R1W7 72 aa10.81□□□□□ -0.68
NEK4-201ENST00000233027 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 Q0VG73 95 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 ARTNQ5T4W7 220 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 IL17RELQ6ZVW7 336 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 LURAP1LQ8IV03 231 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 PFN1P07737 140 aaKnown RBP10.8□□□□□ -0.68
NEK4-201ENST00000233027 GFRA4Q9GZZ7 299 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 TRPM7Q96QT4 1865 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
NEK4-201ENST00000233027 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
NEK4-201ENST00000233027 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
NEK4-201ENST00000233027 MBD3L2Q8NHZ7 208 aaPredicted RBP10.8□□□□□ -0.68
NEK4-201ENST00000233027 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 CD5LO43866 347 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 RUSC1-AS1Q66K80 236 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 GNLYP22749 145 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 CFPP27918 469 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 JPT2Q9H910 190 aa10.8□□□□□ -0.68
NEK4-201ENST00000233027 LINC01549A6NIU2 74 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
NEK4-201ENST00000233027 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 RASL10AQ92737 203 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
NEK4-201ENST00000233027 VGLL1Q99990 258 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 DKK1O94907 266 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
NEK4-201ENST00000233027 AHCTF1Q8WYP5 2266 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 FER1L5A0AVI2 2057 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 TCF20Q9UGU0 1960 aaKnown RBP10.79□□□□□ -0.68
NEK4-201ENST00000233027 NDUFS8O00217 210 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 IGKV1-39P01597 117 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 IGKV1D-39P04432 117 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 TMEM75Q8N9X5 138 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 SAA4P35542 130 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 LAMTOR3Q9UHA4 124 aa10.79□□□□□ -0.68
NEK4-201ENST00000233027 C9JAW5 83 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 E7EQL1 145 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 Q6ZWC4 215 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 ZNF114Q8NC26 417 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 FAM223BA6NKX1 122 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 FAM223AQ8IWN6 122 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 ZNF48Q96MX3 618 aaPredicted RBP10.78□□□□□ -0.68
NEK4-201ENST00000233027 OOSP1A8MZH6 123 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 SLAQ13239 276 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 WDR86Q86TI4 376 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 C1orf147Q96MC9 270 aaPredicted RBP10.78□□□□□ -0.68
NEK4-201ENST00000233027 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 RTTNQ86VV8 2226 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 A0A087WX48 190 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 ZNF503-AS2A6NEH8 195 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 OVOL3O00110 214 aa10.78□□□□□ -0.68
NEK4-201ENST00000233027 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
NEK4-201ENST00000233027 MRPL52Q86TS9 123 aaKnown RBP10.77□□□□□ -0.68
NEK4-201ENST00000233027 BPESC1Q9GZL8 116 aa10.77□□□□□ -0.68
NEK4-201ENST00000233027 CACNA1DQ01668 2161 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 GHRHP01286 108 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 EDA2RQ9HAV5 297 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 MSRB2Q9Y3D2 182 aa10.77□□□□□ -0.69
NEK4-201ENST00000233027 IGHG3P01860 377 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 ZNF562Q6V9R5 426 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 KLHL30-AS1Q8NEE0 82 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 LEPROTO15243 131 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 GAGE2AQ6NT46 116 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 V9GYV3 84 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 IGHV1-24A0A0C4DH33 117 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 SYNJ2BPP57105 145 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 DTX2Q86UW9 622 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 FNDC1Q4ZHG4 1894 aaPredicted RBP10.76□□□□□ -0.69
NEK4-201ENST00000233027 NDUFB8O95169 186 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
NEK4-201ENST00000233027 C17orf58Q2M2W7 97 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms