RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TNFAIP6P98066 277 aaPredicted RBP11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 LTAP01374 205 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 LYZP61626 148 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 MT-ATP8P03928 68 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 PRSS1P07477 247 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 TCTEX1D4Q5JR98 221 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
PCDHB3-201ENST00000231130 MALRD1Q5VYJ5 2156 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 PRR33A8MZF0 331 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 UFC1Q9Y3C8 167 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 F8W1H4 67 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 RITA1Q96K30 269 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 Q9H3A6 140 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 TECTAO75443 2155 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 ZGRF1Q86YA3 2104 aa11.32□□□□□ -0.6
PCDHB3-201ENST00000231130 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 ABHD17AQ96GS6 310 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 S4R3C0 116 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 TTC28Q96AY4 2481 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 CGB3P0DN86 165 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 CGB7P0DN87 165 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 CFHR2P36980 270 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
PCDHB3-201ENST00000231130 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 CHAC1Q9BUX1 264 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 SPRY4Q9C004 299 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 WT1P19544 449 aaPredicted RBP11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 MBNL2Q5VZF2 373 aaKnown RBP11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 RBP4P02753 201 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
PCDHB3-201ENST00000231130 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 ZNF714Q96N38 554 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 APC2O95996 2303 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 TCRAP04437 139 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 CLEC3BP05452 202 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 CCL17Q92583 94 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 ZNF71Q9NQZ8 489 aaPredicted RBP11.29□□□□□ -0.6
PCDHB3-201ENST00000231130 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 C1orf210Q8IVY1 113 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 HIST1H4GQ99525 98 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 PTPRZ1P23471 2315 aaPredicted RBP11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 AGRNO00468 2067 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 D6R8Y8 96 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 TGFAP01135 160 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 CNTFRP26992 372 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 RIGQ13278 110 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
PCDHB3-201ENST00000231130 IGLL5B9A064 214 aa11.27□□□□□ -0.6
PCDHB3-201ENST00000231130 SMKR1H3BMG3 65 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 H3BVH4 76 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 OSR1Q8TAX0 266 aaPredicted RBP11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 BDP1A6H8Y1 2624 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 CR1LQ2VPA4 569 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 C22orf34Q6ZV56 151 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.61
PCDHB3-201ENST00000231130 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 A0A1B0GW15 77 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 TNFRSF1AP19438 455 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 FAM27E3Q08E93 113 aa11.26□□□□□ -0.61
PCDHB3-201ENST00000231130 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms