RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 NPFFO15130 113 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 NPPCP23582 126 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 FXYD4P59646 89 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 LMO4P61968 165 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 HERVK_113P63121 156 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 TNFAIP6P98066 277 aaPredicted RBP3.25□□□□□ -1.89
CDH9-201ENST00000231021 DEFB134Q4QY38 66 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 MUC21Q5SSG8 566 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 C6orf201Q7Z4U5 140 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 DCANP1Q8TF63 244 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 FAM103A1Q9BTL3 118 aaKnown RBP3.25□□□□□ -1.89
CDH9-201ENST00000231021 TMEM167BQ9NRX6 74 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 TNFRSF19Q9NS68 423 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 IGHG1P01857 330 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 CNTFRP26992 372 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 RPS27P42677 84 aaKnown RBP3.25□□□□□ -1.89
CDH9-201ENST00000231021 CRIP3Q6Q6R5 217 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 PCSK4Q6UW60 755 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 CLEC19AQ6UXS0 136 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 SYT8Q8NBV8 401 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 SPTSSAQ969W0 71 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 FANCMQ8IYD8 2048 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 E9PLD3 99 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 NAPSAO96009 420 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 PFN2P35080 140 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 SLURP1P55000 103 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 PPP1CAP62136 330 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 HES1Q14469 280 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 TCF23Q7RTU1 214 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 METTL27Q8N6F8 245 aaPredicted RBP3.25□□□□□ -1.89
CDH9-201ENST00000231021 OR2M3Q8NG83 312 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 FLVCR1-AS1Q8TAF5 88 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 H1FXQ92522 213 aaKnown RBP3.25□□□□□ -1.89
CDH9-201ENST00000231021 NABP1Q96AH0 204 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 NPCDR1Q9BY65 106 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 PRTFDC1Q9NRG1 225 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 SPCS1Q9Y6A9 102 aa3.25□□□□□ -1.89
CDH9-201ENST00000231021 IGHV1OR21-1A0A087WYE8 117 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 NDUFC2-KCTD14E9PQ53 114 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 H3BSH0 61 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 K7ESM1 405 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 LINC01545Q5VT33 79 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 C11orf53Q8IXP5 236 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 KMT2EQ8IZD2 1858 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 GGTLC1Q9BX51 225 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 SPRR3Q9UBC9 169 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 DKK2Q9UBU2 259 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 KIF26BQ2KJY2 2108 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 BPTFQ12830 3046 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 C15orf62A8K5M9 175 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 H0Y9J4 135 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 H0YGG7 62 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 ATP6V0E1O15342 81 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 IGKV1D-33P01593 117 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 IGKV1-33P01594 117 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 KLRD1Q13241 179 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 C10orf128Q5T292 105 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 EBLN2Q6P2I7 272 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 TRPT1Q86TN4 253 aaKnown RBP3.24□□□□□ -1.89
CDH9-201ENST00000231021 ELSPBP1Q96BH3 223 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 VGLL1Q99990 258 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 ZNF835Q9Y2P0 537 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 TRPM6Q9BX84 2022 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 CPAMD8Q8IZJ3 1885 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 EML5Q05BV3 1969 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 CACNA1IQ9P0X4 2223 aa3.24□□□□□ -1.89
CDH9-201ENST00000231021 TRAV8-3A0A0A6YYJ7 113 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 A0A0J9YXV3 536 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 UBE2L5PA0A1B0GUS4 154 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 WI2-2373I1.2A0A1W2PRP0 233 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 PMS2P5A8MQ11 134 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 M0R381 172 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 LEPROTL1O95214 131 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 CISD3P0C7P0 127 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 Q56UQ5 140 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 ZNF818PQ6ZRF7 136 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.23□□□□□ -1.89
CDH9-201ENST00000231021 TMEM133Q9H2Q1 129 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 RNF114Q9Y508 228 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 F11RQ9Y624 299 aaKnown RBP3.23□□□□□ -1.89
CDH9-201ENST00000231021 OBSL1O75147 1896 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 ZNF407Q9C0G0 2248 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 TEX50A0A1B0GTY4 177 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 A0A1B0GX51 115 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 SRSF9Q13242 221 aaKnown RBP eCLIP3.23□□□□□ -1.89
CDH9-201ENST00000231021 Q6P435 159 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 OOSP2Q86WS3 158 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 ZNF799Q96GE5 643 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 GFRA4Q9GZZ7 299 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 K7ERJ3 54 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 CLPSP04118 112 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 P0C879 139 aa3.23□□□□□ -1.89
CDH9-201ENST00000231021 ZNF138P52744 262 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms