RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
LTBR-201ENST00000228918 RHOGP84095 191 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 LINC00173Q6ZV60 143 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 NPBQ8NG41 125 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.82□□□□□ -0.36
LTBR-201ENST00000228918 LEPROTL1O95214 131 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 PSG3Q16557 428 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 FBXL19-AS1Q494R0 122 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 HILPDAQ9Y5L2 63 aa12.82□□□□□ -0.36
LTBR-201ENST00000228918 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 WI2-2373I1.2A0A1W2PRP0 233 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 K7EQM0 130 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 ZNF414Q96IQ9 312 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 ASCL2Q99929 193 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 ARHGAP32A7KAX9 2087 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 TACC2O95359 2948 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 ARF6P62330 175 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 KLF17Q5JT82 389 aaPredicted RBP12.81□□□□□ -0.36
LTBR-201ENST00000228918 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 IGFBPL1Q8WX77 278 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
LTBR-201ENST00000228918 LY6HO94772 140 aa12.8□□□□□ -0.36
LTBR-201ENST00000228918 KLRD1Q13241 179 aa12.8□□□□□ -0.36
LTBR-201ENST00000228918 ABCA4P78363 2273 aa12.8□□□□□ -0.36
LTBR-201ENST00000228918 FCGR2BP31994 310 aaPredicted RBP12.79□□□□□ -0.36
LTBR-201ENST00000228918 FOXC1Q12948 553 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 SMIM15Q7Z3B0 74 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 S4R3C0 116 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 PTPRQQ9UMZ3 2332 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 PRB4P10163 310 aaPredicted RBP12.79□□□□□ -0.36
LTBR-201ENST00000228918 CEACAM3P40198 252 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 CRIP1P50238 77 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 ZNF138P52744 262 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 RIGQ13278 110 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 C5orf64Q2M2E5 130 aa12.79□□□□□ -0.36
LTBR-201ENST00000228918 DCHS2Q6V1P9 2916 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 M0R3E3 92 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 GNG7O60262 68 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 VAMP3Q15836 100 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 BCL6BQ8N143 479 aaPredicted RBP12.78□□□□□ -0.36
LTBR-201ENST00000228918 ZNF48Q96MX3 618 aaPredicted RBP12.78□□□□□ -0.36
LTBR-201ENST00000228918 FANCD2OSQ96PS1 177 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 M0R1W7 72 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 PDE6HQ13956 83 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 ST20Q9HBF5 79 aa12.78□□□□□ -0.36
LTBR-201ENST00000228918 A0A1B0GW15 77 aa12.77□□□□□ -0.36
LTBR-201ENST00000228918 NPIPB5A8MRT5 1133 aa12.77□□□□□ -0.36
LTBR-201ENST00000228918 HES1Q14469 280 aa12.77□□□□□ -0.36
LTBR-201ENST00000228918 CST9LQ9H4G1 147 aa12.77□□□□□ -0.36
LTBR-201ENST00000228918 CEP295Q9C0D2 2601 aa12.77□□□□□ -0.36
LTBR-201ENST00000228918 LRBAP50851 2863 aa12.77□□□□□ -0.37
LTBR-201ENST00000228918 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
LTBR-201ENST00000228918 OCIAD2Q56VL3 154 aa12.77□□□□□ -0.37
LTBR-201ENST00000228918 Q6AWC8 147 aa12.77□□□□□ -0.37
LTBR-201ENST00000228918 TIMD4Q96H15 378 aa12.77□□□□□ -0.37
LTBR-201ENST00000228918 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
LTBR-201ENST00000228918 MFAP4P55083 255 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 C8orf49Q96NF6 230 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 TAX1BP3O14907 124 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 CSN3P07498 182 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 PRTN3P24158 256 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 NDPQ00604 133 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 PET117Q6UWS5 81 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
LTBR-201ENST00000228918 ARPC1AQ92747 370 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 VPS25Q9BRG1 176 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
LTBR-201ENST00000228918 A0A1W2PRD5 423 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 A0A1W2PRF3 423 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 A0A1W2PRM7 423 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 hDV102S1A0JD36 115 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 CBY3A6NI87 242 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 HSPB8Q9UJY1 196 aa12.75□□□□□ -0.37
LTBR-201ENST00000228918 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 ZNF562Q6V9R5 426 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 PTPRZ1P23471 2315 aaPredicted RBP12.74□□□□□ -0.37
LTBR-201ENST00000228918 CCL21O00585 134 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 CDSNQ15517 529 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 MPV17L2Q567V2 206 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 C21orf62Q9NYP8 219 aa12.74□□□□□ -0.37
LTBR-201ENST00000228918 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
LTBR-201ENST00000228918 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
LTBR-201ENST00000228918 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
LTBR-201ENST00000228918 AP5S1Q9NUS5 200 aa12.73□□□□□ -0.37
LTBR-201ENST00000228918 C11orf71Q6IPW1 123 aa12.73□□□□□ -0.37
LTBR-201ENST00000228918 CSN1S1P47710 185 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 PSG9Q00887 426 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms