RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
PRDM4-201ENST00000228437 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
PRDM4-201ENST00000228437 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
PRDM4-201ENST00000228437 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 CLEC3BP05452 202 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 JMJD8Q96S16 334 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 ONECUT1Q9UBC0 465 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 Q86TA4 180 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 MBD6Q96DN6 1003 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
PRDM4-201ENST00000228437 F2RL2O00254 374 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 Q1RN00 199 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 FOXE3Q13461 319 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 WIPF2Q8TF74 440 aaPredicted RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 CNTFRP26992 372 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 SLC25A48Q6ZT89 311 aaKnown RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 RPRMLQ8N4K4 120 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 TMEM133Q9H2Q1 129 aa11.68□□□□□ -0.54
PRDM4-201ENST00000228437 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 NTN3O00634 580 aaPredicted RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 NEU4Q8WWR8 484 aaPredicted RBP11.68□□□□□ -0.54
PRDM4-201ENST00000228437 SP9P0CG40 484 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 PSMB2P49721 201 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 WFDC2Q14508 124 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 OR9G4Q8NGQ1 327 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 URB1-AS1Q96HZ7 61 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
PRDM4-201ENST00000228437 SLC25A39Q9BZJ4 359 aaPredicted RBP11.67□□□□□ -0.54
PRDM4-201ENST00000228437 SS18L1O75177 396 aaPredicted RBP11.67□□□□□ -0.54
PRDM4-201ENST00000228437 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
PRDM4-201ENST00000228437 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
PRDM4-201ENST00000228437 FXYD2P54710 66 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 CYSLTR1Q9Y271 337 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 NPFFR1Q9GZQ6 430 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 RAB9AP51151 201 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 RBPJQ06330 500 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 GAGE13Q4V321 117 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
PRDM4-201ENST00000228437 GAGE12HA6NDE8 117 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 NDUFS8O00217 210 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
PRDM4-201ENST00000228437 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
PRDM4-201ENST00000228437 LRP4O75096 1905 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 G3V4G9 280 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 MGPP08493 103 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 C8orf46Q8TAG6 207 aa11.65□□□□□ -0.54
PRDM4-201ENST00000228437 LTAP01374 205 aa11.65□□□□□ -0.55
PRDM4-201ENST00000228437 GLRXP35754 106 aa11.65□□□□□ -0.55
PRDM4-201ENST00000228437 ATP5G2Q06055 141 aa11.65□□□□□ -0.55
PRDM4-201ENST00000228437 LINC01545Q5VT33 79 aa11.65□□□□□ -0.55
PRDM4-201ENST00000228437 NPYP01303 97 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 ATP5IP56385 69 aaPredicted RBP11.64□□□□□ -0.55
PRDM4-201ENST00000228437 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
PRDM4-201ENST00000228437 VKORC1Q9BQB6 163 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 LYNX1G3V0Z9 82 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 IGKCP01834 107 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 LYNX1P0DP58 116 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 C1orf210Q8IVY1 113 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 DDB2Q92466 427 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 CLUHP3Q96NS8 147 aa11.64□□□□□ -0.55
PRDM4-201ENST00000228437 REV3LO60673 3130 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 SPTBN5Q9NRC6 3674 aaKnown RBP11.63□□□□□ -0.55
PRDM4-201ENST00000228437 IGHV1-46P01743 117 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 UBALD2Q8IYN6 164 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
PRDM4-201ENST00000228437 C22orf46C9J442 243 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 GATA1P15976 413 aaPredicted RBP11.63□□□□□ -0.55
PRDM4-201ENST00000228437 MC5RP33032 325 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 TMEM158Q8WZ71 300 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
PRDM4-201ENST00000228437 RITA1Q96K30 269 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
PRDM4-201ENST00000228437 MSMPQ1L6U9 139 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 SH2D1AO60880 128 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 SCGB2A1O75556 95 aa11.62□□□□□ -0.55
PRDM4-201ENST00000228437 C2orf91Q6ZV80 131 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms