RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 PRNTQ86SH4 94 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 TMEM219Q86XT9 240 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 ZNF331Q9NQX6 463 aaPredicted RBP14.86□□□□□ -0.03
YBX3-201ENST00000228251 RABAC1Q9UI14 185 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 ZFP30Q9Y2G7 519 aa14.86□□□□□ -0.03
YBX3-201ENST00000228251 FAM231BA6NCW3 169 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 A8MWL6 223 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 M0R3E3 92 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 P01737 135 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 RPL7P18124 248 aaKnown RBP14.85□□□□□ -0.03
YBX3-201ENST00000228251 GPR183P32249 361 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 TOMM20LQ6UXN7 152 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 PSG8Q9UQ74 426 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 SPG11Q96JI7 2443 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 ZNF253O75346 499 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 MSMBP08118 114 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 RAB4BP61018 213 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 OR4B1Q8NGF8 309 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 ZC2HC1AQ96GY0 325 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 ZFHX3Q15911 3703 aa14.85□□□□□ -0.03
YBX3-201ENST00000228251 ZFYVE26Q68DK2 2539 aa14.84□□□□□ -0.03
YBX3-201ENST00000228251 CLPSL1A2RUU4 121 aa14.84□□□□□ -0.03
YBX3-201ENST00000228251 KIAA1644Q3SXP7 199 aa14.84□□□□□ -0.03
YBX3-201ENST00000228251 TCF24Q7RTU0 167 aa14.84□□□□□ -0.03
YBX3-201ENST00000228251 CRYBG3Q68DQ2 2970 aa14.84□□□□□ -0.03
YBX3-201ENST00000228251 IGHG4P01861 327 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 APCSP02743 223 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 PRB1P04280 392 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 CLEC3BP05452 202 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 PAFAH1B2P68402 229 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 COX8CQ7Z4L0 72 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 ATP6V0BQ99437 205 aa14.83□□□□□ -0.03
YBX3-201ENST00000228251 SOX21Q9Y651 276 aaPredicted RBP14.83□□□□□ -0.03
YBX3-201ENST00000228251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■■■□ 20.6
YBX3-201ENST00000228251 SERTM2A0A1B0GWG4 89 aa14.83□□□□□ -0.04
YBX3-201ENST00000228251 FOXA3P55318 350 aaPredicted RBP14.83□□□□□ -0.04
YBX3-201ENST00000228251 PSG9Q00887 426 aa14.83□□□□□ -0.04
YBX3-201ENST00000228251 SRSF1Q07955 248 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■□□□□ 10.8
YBX3-201ENST00000228251 TRBV7-1A0A0A6YYK4 115 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 A6NDX4 124 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 K7EQM0 130 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 SRIP30626 198 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 CRIP1P50238 77 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 DSCR9P59020 149 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 AAMDCQ9H7C9 122 aa14.82□□□□□ -0.04
YBX3-201ENST00000228251 ZNF462Q96JM2 2506 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 A0A087X0K7 114 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 A0A096LNT2 108 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 TRAV41A0A0B4J266 112 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 APOHP02749 345 aaPredicted RBP14.81□□□□□ -0.04
YBX3-201ENST00000228251 IGF1P05019 195 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 BAGE3Q86Y29 109 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 EEF1AKMT3Q96AZ1 226 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 NOL4LQ96MY1 436 aaPredicted RBP14.81□□□□□ -0.04
YBX3-201ENST00000228251 FBN2P35556 2912 aa14.81□□□□□ -0.04
YBX3-201ENST00000228251 BUB3O43684 328 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 BRI3O95415 125 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 COL8A1P27658 744 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 CLEC19AQ6UXS0 136 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
YBX3-201ENST00000228251 Q6ZWC4 215 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 NRGNQ92686 78 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 DAZAP1Q96EP5 407 aaKnown RBP14.8□□□□□ -0.04
YBX3-201ENST00000228251 RCHY1Q96PM5 261 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 IGHV3-35A0A0C4DH35 117 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 S100A7P31151 101 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 TPPP2P59282 170 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 MS4A10Q96PG2 267 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 EPG5Q9HCE0 2579 aa14.8□□□□□ -0.04
YBX3-201ENST00000228251 B4DSR2 109 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 AVPP01185 164 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 RAB9AP51151 201 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 PKIAP61925 76 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 HBBP68871 147 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 KLF5Q13887 457 aaPredicted RBP14.79□□□□□ -0.04
YBX3-201ENST00000228251 ZNF843Q8N446 348 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 C18orf32Q8TCD1 76 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 ASCL2Q99929 193 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 U3KQE9 123 aa14.79□□□□□ -0.04
YBX3-201ENST00000228251 FAM223BA6NKX1 122 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 A8MWP6 167 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 IGHG2P01859 326 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 FAM223AQ8IWN6 122 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 OR2D3Q8NGH3 330 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 IGHV3OR16-8A0A075B7F1 116 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 PRB4P10163 310 aaPredicted RBP14.78□□□□□ -0.04
YBX3-201ENST00000228251 PGLYRP4Q96LB8 373 aa14.78□□□□□ -0.04
YBX3-201ENST00000228251 ALKBH7Q9BT30 221 aaPredicted RBP14.78□□□□□ -0.04
YBX3-201ENST00000228251 TRAV20A0A0B4J274 112 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 FBLL1A6NHQ2 334 aaKnown RBP14.77□□□□□ -0.05
YBX3-201ENST00000228251 CHEK1O14757 476 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 GPX1P07203 203 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 SLC25A16P16260 332 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 PPIFP30405 207 aaKnown RBP14.77□□□□□ -0.05
YBX3-201ENST00000228251 IQCJQ1A5X6 159 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 KCNS1Q96KK3 526 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 C8orf49Q96NF6 230 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 SSBP4Q9BWG4 385 aaPredicted RBP14.77□□□□□ -0.05
YBX3-201ENST00000228251 HIF1ANQ9NWT6 349 aa14.77□□□□□ -0.05
YBX3-201ENST00000228251 IGKV2-40A0A087WW87 121 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms