RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LYPD1Q8N2G4 141 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 NCR2O95944 276 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 GATA4P43694 442 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 IGKV3D-20A0A0C4DH25 116 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 TDGF1P13385 188 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 ZNF562Q6V9R5 426 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 LYPD6BQ8NI32 183 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 NHP2Q9NX24 153 aaKnown RBP9.32□□□□□ -0.92
NOD1-201ENST00000222823 TYMSP04818 313 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 KRTAP27-1Q3LI81 207 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 C5orf30Q96GV9 206 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 TNCP24821 2201 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 ZNF503-AS2A6NEH8 195 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 D6R8Y8 96 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 CEACAM8P31997 349 aaPredicted RBP9.32□□□□□ -0.92
NOD1-201ENST00000222823 USMG5Q96IX5 58 aa9.32□□□□□ -0.92
NOD1-201ENST00000222823 H3BUT2 72 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 ERVK11-1P61568 191 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 C3orf36Q3SXR2 165 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 PRR31Q5SQ13 230 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 OTOGLQ3ZCN5 2332 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 IGFL4Q6B9Z1 124 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 WDR86Q86TI4 376 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
NOD1-201ENST00000222823 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 CYYR1Q96J86 154 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
NOD1-201ENST00000222823 LINC01549A6NIU2 74 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 FCN3O75636 299 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 TOMM40O96008 361 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 BEND2Q8NDZ0 799 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 CD28P10747 220 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 PSG3Q16557 428 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 PAX9P55771 341 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 NSUN5P1Q3KNT7 163 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 TTC32Q5I0X7 151 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 Q8TCH9 128 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 RHPN1-AS1Q9BWJ2 59 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 NCOR1P1Q9H4R4 102 aa9.3□□□□□ -0.92
NOD1-201ENST00000222823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.29□□□□□ -0.92
NOD1-201ENST00000222823 IGKCP01834 107 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 SLC25A16P16260 332 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 CFHR2P36980 270 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
NOD1-201ENST00000222823 BPTFQ12830 3046 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 CD300EQ496F6 205 aaPredicted RBP9.29□□□□□ -0.92
NOD1-201ENST00000222823 SH2D1AO60880 128 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 SAP30O75446 220 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 ZNF876PQ49A33 203 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 RNF182Q8N6D2 247 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 OVOL3O00110 214 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 LAGE3Q14657 143 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 SHANK2-AS3Q9BTD1 123 aa9.29□□□□□ -0.92
NOD1-201ENST00000222823 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 IGKV1-39P01597 117 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 IGKV1D-39P04432 117 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 PLNP26678 52 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 LOXP28300 417 aaPredicted RBP9.28□□□□□ -0.92
NOD1-201ENST00000222823 UBE2E1P51965 193 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
NOD1-201ENST00000222823 NDUFA4L2Q9NRX3 87 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 CMC4P56277 68 aaPredicted RBP9.28□□□□□ -0.92
NOD1-201ENST00000222823 PDE6HQ13956 83 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 TMEM249Q2WGJ8 235 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 FAM215AQ9Y5M1 114 aa9.28□□□□□ -0.92
NOD1-201ENST00000222823 IGLV3-9A0A075B6K5 115 aa9.27□□□□□ -0.92
NOD1-201ENST00000222823 PYY3Q5JQD4 70 aa9.27□□□□□ -0.92
NOD1-201ENST00000222823 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.92
NOD1-201ENST00000222823 RCHY1Q96PM5 261 aa9.27□□□□□ -0.92
NOD1-201ENST00000222823 MS4A6AQ9H2W1 248 aa9.27□□□□□ -0.92
NOD1-201ENST00000222823 GTSCR1Q86UQ5 136 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 CCDC168Q8NDH2 2452 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 DYSFO75923 2080 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 FAM223BA6NKX1 122 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 NDUFS8O00217 210 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 C17orf58Q2M2W7 97 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 FAM223AQ8IWN6 122 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
NOD1-201ENST00000222823 DAZ1Q9NQZ3 744 aaKnown RBP9.27□□□□□ -0.93
NOD1-201ENST00000222823 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms