RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 NEU4Q8WWR8 484 aaPredicted RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 WBP1Q96G27 269 aa11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 BMPERQ8N8U9 685 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 SMRP1Q8NCR6 262 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 TMEM133Q9H2Q1 129 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 ATP5G1P05496 136 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 SLC22A18ASQ8N1D0 253 aa11.27□□□□□ -0.61
SIPA1L3-201ENST00000222345 CCL25O15444 150 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 PAX8Q06710 450 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 NPYP01303 97 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 Q86TA4 180 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 LYZL4Q96KX0 146 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 S4R3C0 116 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 CHCHD2Q9Y6H1 151 aaPredicted RBP11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 MGAMO43451 1857 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 PSG7Q13046 419 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 K7EMI3 77 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 RLFQ13129 1914 aa11.26□□□□□ -0.61
SIPA1L3-201ENST00000222345 TRBV7-1A0A0A6YYK4 115 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 SPXQ9BT56 116 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 PLXNB1O43157 2135 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 CELA2AP08217 269 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 PCOLCEQ15113 449 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 INS-IGF2F8WCM5 200 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 INSP01308 110 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 CECR9P0C854 216 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 ATP5J2P56134 94 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 KLRD1Q13241 179 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 RNF5Q99942 180 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 GLMPQ8WWB7 406 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 F8VRH5 84 aa11.25□□□□□ -0.61
SIPA1L3-201ENST00000222345 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 CELA3AP09093 270 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 VDAC2P45880 294 aaPredicted RBP11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 NCOR1O75376 2440 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 IGHG3P01860 377 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
SIPA1L3-201ENST00000222345 IGKV1-5P01602 117 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 HCFC1P51610 2035 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 CRYBA4P53673 196 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 FXYD7P58549 80 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 SS18Q15532 418 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 C5orf67F2Z3F1 127 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 NTF4P34130 210 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 CDCP2Q5VXM1 449 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 SLC25A16P16260 332 aa11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
SIPA1L3-201ENST00000222345 ZNF474Q6S9Z5 364 aaPredicted RBP11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 C9JQL5 133 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 SPATA25Q9BR10 227 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 TET1Q8NFU7 2136 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 H3BQ85 93 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 EGR2P11161 476 aaPredicted RBP11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 HGFACQ04756 655 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 V9GYV3 84 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 PRR19A6NJB7 356 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 COA6Q5JTJ3 125 aaKnown RBP11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 FAM216BQ8N7L0 139 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
SIPA1L3-201ENST00000222345 HAMPP81172 84 aa11.21□□□□□ -0.61
SIPA1L3-201ENST00000222345 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.61
SIPA1L3-201ENST00000222345 QRFPP83859 136 aa11.21□□□□□ -0.61
SIPA1L3-201ENST00000222345 KLF5Q13887 457 aaPredicted RBP11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 ARMS2P0C7Q2 107 aa11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 ZDBF2Q9HCK1 2354 aa11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 A0A1W2PR77 199 aa11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 C17orf100A8MU93 164 aa11.21□□□□□ -0.62
SIPA1L3-201ENST00000222345 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms