RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 NUDT10Q8NFP7 164 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 NUDT11Q96G61 164 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 ZANQ9Y493 2812 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 TRBV6-1A0A0K0K1D8 114 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 PRR27Q6MZM9 219 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 PSMG3-AS1Q96PY0 264 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-201ENST00000216840 C9orf139Q6ZV77 190 aa13.31□□□□□ -0.28
RABGGTA-201ENST00000216840 LINC00518Q8N0U6 118 aa13.31□□□□□ -0.28
RABGGTA-201ENST00000216840 TRAPPC1Q9Y5R8 145 aa13.31□□□□□ -0.28
RABGGTA-201ENST00000216840 NBPF19A0A087WUL8 3843 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 DIRC3C9JPN6 131 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 M0R3E3 92 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 BUB3O43684 328 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 PSG9Q00887 426 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 TMEM75Q8N9X5 138 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 AAMDCQ9H7C9 122 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 RAB9AP51151 201 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 TCL1AP56279 114 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 CFHR3Q02985 330 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 GRAMD2BQ96HH9 432 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 USMG5Q96IX5 58 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
RABGGTA-201ENST00000216840 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 CYB5R2Q6BCY4 276 aa13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 TMEM183AQ8IXX5 376 aa13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 OR5R1Q8NH85 324 aa13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 ZNF580Q9UK33 172 aa13.29□□□□□ -0.28
RABGGTA-201ENST00000216840 FRMD6-AS1P0C7T7 363 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 PF4V1P10720 104 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 ARL3P36405 182 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 IFITM10A6NMD0 228 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 K7EQM0 130 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 ZNF253O75346 499 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 PSG3Q16557 428 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 Q71RC1 249 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 METTL26Q96S19 204 aa13.28□□□□□ -0.28
RABGGTA-201ENST00000216840 C19orf71A6NCJ1 209 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 APOHP02749 345 aaPredicted RBP13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 CBLN1P23435 193 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 Q6YL49 198 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 CIARTQ8N365 385 aaPredicted RBP13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 PRSS22Q9GZN4 317 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 PSG8Q9UQ74 426 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 U3KQE9 123 aa13.27□□□□□ -0.28
RABGGTA-201ENST00000216840 CREBBPQ92793 2442 aa13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 A0A087X0K7 114 aa13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHV3-66A0A0C4DH42 116 aa13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 C1orf194Q5T5A4 169 aa13.27□□□□□ -0.29
RABGGTA-201ENST00000216840 IZUMO1RA6ND01 250 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 SPINK4O60575 86 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 S100A8P05109 93 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 CSN1S1P47710 185 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 SLC35B1P78383 322 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 ARL6IP6Q8N6S5 226 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 VPREB3Q9UKI3 123 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHV3OR16-13A0A075B7E8 117 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHV3-74A0A0B4J1X5 117 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 ZNF785A8K8V0 405 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHG4P01861 327 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 IGHV3-49A0A0A0MS15 119 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 WFDC11Q8NEX6 87 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 ASCL2Q99929 193 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 GNB1LQ9BYB4 327 aa13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-201ENST00000216840 P01737 135 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 COA6Q5JTJ3 125 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 GPR61Q9BZJ8 451 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 MRPL18Q9H0U6 180 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 A0A0G2JLM5 398 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 NDUFA4O00483 81 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 MEOX2P50222 304 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 PDZD11Q5EBL8 140 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 CT83Q5H943 113 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms