RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TMEM41BQ5BJD5 291 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
UPK3A-201ENST00000216211 GLMPQ8WWB7 406 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 UBE2L5PA0A1B0GUS4 154 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 RAB19A4D1S5 217 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 HELTA6NFD8 242 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 IGLL5B9A064 214 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 FNDC10F2Z333 226 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 MIFP14174 115 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 SERF2P84101 59 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 PRR20EP86478 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 PRR20CP86479 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 PRR20DP86480 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 PRR20BP86481 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 PRR20AP86496 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 ETFRF1Q6IPR1 90 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 Q6ZRG5 221 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 ACY3Q96HD9 319 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 FAM210AQ96ND0 272 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 RFNGQ9Y644 331 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 X6R8D5 127 aa10.87□□□□□ -0.67
UPK3A-201ENST00000216211 ELOA3CA0A087WX78 387 aaPredicted RBP10.86□□□□□ -0.67
UPK3A-201ENST00000216211 CAMLGP49069 296 aa10.86□□□□□ -0.67
UPK3A-201ENST00000216211 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
UPK3A-201ENST00000216211 WDR83OSQ9Y284 106 aa10.86□□□□□ -0.67
UPK3A-201ENST00000216211 C11orf94C9JXX5 98 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 MPDU1O75352 247 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 TOMM40O96008 361 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 RD3LP0DJH9 198 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 TCTAP57738 103 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 AKR1C8PQ5T2L2 129 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 UQCC3Q6UW78 93 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 SIGLEC15Q6ZMC9 328 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 Q6ZTC4 211 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 CSNK1G2-AS1Q8NCQ2 148 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 RSG1Q9BU20 258 aa10.85□□□□□ -0.67
UPK3A-201ENST00000216211 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 BUB3O43684 328 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 PSG1P11464 419 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 FGF7P21781 194 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 OR51G1Q8NGK1 321 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 HERC2O95714 4834 aa10.84□□□□□ -0.67
UPK3A-201ENST00000216211 C17orf112F2Z3M2 114 aa10.83□□□□□ -0.68
UPK3A-201ENST00000216211 GPX4P36969 197 aaPredicted RBP10.83□□□□□ -0.68
UPK3A-201ENST00000216211 FHITP49789 147 aa10.83□□□□□ -0.68
UPK3A-201ENST00000216211 SNRPD3P62318 126 aaKnown RBP10.83□□□□□ -0.68
UPK3A-201ENST00000216211 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
UPK3A-201ENST00000216211 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
UPK3A-201ENST00000216211 CELA1Q9UNI1 258 aa10.83□□□□□ -0.68
UPK3A-201ENST00000216211 TRAV10A0A0B4J240 114 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 KRBOX1C9JBD0 128 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 MBP02144 154 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 TOR2AQ5JU69 321 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 ZNF709Q8N972 641 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 RNF125Q96EQ8 232 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 RPRMQ9NS64 109 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 XCL2Q9UBD3 114 aa10.82□□□□□ -0.68
UPK3A-201ENST00000216211 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
UPK3A-201ENST00000216211 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
UPK3A-201ENST00000216211 H3BMM0 161 aa10.81□□□□□ -0.68
UPK3A-201ENST00000216211 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
UPK3A-201ENST00000216211 SEPSECSQ9HD40 501 aaKnown RBP10.81□□□□□ -0.68
UPK3A-201ENST00000216211 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 ZFP92A6NM28 416 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 HBE1P02100 147 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 HLA-DRB4P13762 266 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 DEFB1P60022 68 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
UPK3A-201ENST00000216211 ZNF90Q03938 601 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 GAMTQ14353 236 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 SLC35E1Q96K37 410 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 C1QTNF4Q9BXJ3 329 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 KCNIP2Q9NS61 270 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 HLA-DRB4X5D2U9 266 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
UPK3A-201ENST00000216211 DNAH2Q9P225 4427 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 IGKV3-20P01619 116 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 RAB2AP61019 212 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 RAB31Q13636 194 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 GDF5OSQ5U4N7 250 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 TEPPQ6URK8 271 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 BPIFCQ8NFQ6 507 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 MGST2Q99735 147 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 SCRT1Q9BWW7 348 aa10.79□□□□□ -0.68
UPK3A-201ENST00000216211 FAT2Q9NYQ8 4349 aa10.78□□□□□ -0.68
UPK3A-201ENST00000216211 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms