RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 CNOT1A5YKK6 2376 aaKnown RBP11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 PRRG2O14669 202 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 LOXL3P58215 753 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 CD69Q07108 199 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 RIGQ13278 110 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 DEFB109BQ30KR1 87 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 GATD1Q8NB37 220 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 RALYQ9UKM9 306 aaKnown RBP11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 FSTL3O95633 263 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 PLAUP00749 431 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 CFHR2P36980 270 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 PRCDQ00LT1 54 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 C12orf74Q32Q52 190 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 C2orf83Q53S99 150 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 IGFL2Q6UWQ7 119 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 OR1L4Q8NGR5 311 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 UFC1Q9Y3C8 167 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 SLC25A15Q9Y619 301 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 M0R1B8 84 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 SPRY3O43610 288 aa11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
TMEM38A-201ENST00000187762 NPIPB5A8MRT5 1133 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 NDUFS7O75251 213 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 LCNL1Q6ZST4 164 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 PRELID3AQ96N28 172 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 DLL1O00548 723 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 RNASE2P10153 161 aaKnown RBP11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
TMEM38A-201ENST00000187762 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 MGAQ8IWI9 3026 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 WI2-2373I1.2A0A1W2PRP0 233 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 D6R8Y8 96 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 PAX8Q06710 450 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 SRSF1Q07955 248 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 WFDC3Q8IUB2 231 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 CACNG8Q8WXS5 425 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
TMEM38A-201ENST00000187762 DYSFO75923 2080 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 OTOGLQ3ZCN5 2332 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 TCRAP04437 139 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 RP1L1Q8IWN7 2480 aaPredicted RBP11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 VSTM5A8MXK1 200 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 LINC00305Q7Z4B0 112 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
TMEM38A-201ENST00000187762 PRSS29PA6NIE9 313 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 CNIH1O95406 144 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 BRI3O95415 125 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 Q6AWC8 147 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 ZNF562Q6V9R5 426 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 Q71RC1 249 aaPredicted RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 PIP4P1Q86T03 277 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 Q86TA4 180 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 SRSF12Q8WXF0 261 aaKnown RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 A0A1B0GW15 77 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 ATP5IP56385 69 aaPredicted RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 MZT1Q08AG7 82 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 RITA1Q96K30 269 aa11.78□□□□□ -0.52
TMEM38A-201ENST00000187762 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.52
TMEM38A-201ENST00000187762 SAA2P0DJI9 122 aaPredicted RBP11.77□□□□□ -0.52
TMEM38A-201ENST00000187762 CFAP126Q5VTH2 177 aa11.77□□□□□ -0.52
TMEM38A-201ENST00000187762 Q6ZS92 163 aa11.77□□□□□ -0.52
TMEM38A-201ENST00000187762 RND1Q92730 232 aa11.77□□□□□ -0.52
TMEM38A-201ENST00000187762 UPK2O00526 184 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM169BQ8N8A8 192 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 C8orf46Q8TAG6 207 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 U3KQK5 164 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 TNCP24821 2201 aa11.77□□□□□ -0.53
TMEM38A-201ENST00000187762 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 MBD3L3A6NE82 208 aaPredicted RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 MBD3L2Q8NHZ7 208 aaPredicted RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM90A27PA6NNH2 459 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 H3BTX0 84 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 LHBP01229 141 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms