RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SDK1Q7Z5N4 2213 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PCM1Q15154 2024 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HBDP02042 147 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGKV1-16P04430 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HOXD3P31249 432 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 SEC11AP67812 179 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 FAM120AOSQ5T036 256 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 THAP8Q8NA92 274 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 Q8NFD4 153 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 RNASE7Q9H1E1 156 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 VSIRQ9H7M9 311 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 TRAV12-3A0A0B4J271 114 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 USP17L23D6RBM5 183 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 H3BRN7 92 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 VCYO14598 125 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 HILS1P60008 231 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IFITM2Q01629 132 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 MST1LQ2TV78 715 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 ZNF492Q9P255 531 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 CHTOPQ9Y3Y2 248 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGHV7-4-1A0A0J9YVY3 117 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 SMIM13P0DJ93 91 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 DEFB112Q30KQ8 113 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 KLF17Q5JT82 389 aaPredicted RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 COL5A1-AS1Q5SY13 56 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 MAPK1IP1LQ8NDC0 245 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 OR13C6PQ8NH95 151 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PIKFYVEQ9Y2I7 2098 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-39P01824 125 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 LGALS1P09382 135 aaKnown RBP3.39□□□□□ -1.87
CFTR-201ENST00000003084 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 OCC1Q8TAD7 63 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
CFTR-201ENST00000003084 PRB1P04280 392 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DEFB131AP59861 70 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TMEM249Q2WGJ8 235 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RMI2Q96E14 147 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF581Q9P0T4 197 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 UNC13CQ8NB66 2214 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 APOMO95445 188 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RSPO1Q2MKA7 263 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 MORN3Q6PF18 240 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 Q86TA4 180 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 SPXQ9BT56 116 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DPM2O94777 84 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF25P17030 456 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 DAD1P61803 113 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 C1orf147Q96MC9 270 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 A0A087WX48 190 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 PSCAO43653 123 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 DNAL4O96015 105 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 ERCC8Q13216 396 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RASL10AQ92737 203 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 SLC25A20O43772 301 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 LINC00614P0C842 121 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 FOXA3P55318 350 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 SS18Q15532 418 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 TCTEX1D4Q5JR98 221 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 DUX4L9Q6RFH8 374 aaPredicted RBP3.38□□□□□ -1.87
CFTR-201ENST00000003084 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 RNF182Q8N6D2 247 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
CFTR-201ENST00000003084 FANCMQ8IYD8 2048 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 IGHV4-61A0A0C4DH41 118 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 MUC21A0A0G2JKD1 596 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 MUC21A0A140T8X8 626 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 A8MWV9 139 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 H7C2G1 150 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PAX9P55771 341 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 FXYD7P58549 80 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 LOXL1Q08397 574 aaPredicted RBP3.37□□□□□ -1.87
CFTR-201ENST00000003084 SLAQ13239 276 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 FOXI2Q6ZQN5 318 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ATP6V0BQ99437 205 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 KIAA1549LQ6ZVL6 1849 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ATRXP46100 2492 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 ABCA7Q8IZY2 2146 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 NDUFA3O95167 84 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PRSS57Q6UWY2 283 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
CFTR-201ENST00000003084 C18orf15Q96N68 181 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms