RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Trav13d-3J3QMG8 112 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 LalbaP29752 143 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 A3galt2Q3V1N9 370 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr147Q60886 317 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr1330Q8VEY6 315 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Masp2Q91WP0 685 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Srxn1Q9D975 136 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 AplnrQ9WV08 377 aa9.04□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Gm21874J3QNZ6 232 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Sfrp2P97299 295 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Dhrs2Q149L0 282 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Tmprss11fQ8BHM9 439 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Prr32A2AFE9 284 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 P01795 144 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Mpzl1Q3TEW6 270 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr1256Q8VGP1 306 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Pom121l12A0A1B0GSJ4 278 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 AesP63002 197 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Khdc1aQ3UWR2 166 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Omt2bD3YX29 119 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 P01759 136 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Trmt61aQ80XC2 290 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Immp2lQ8BPT6 175 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 TinagQ9WUR0 475 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Gm2026A2ART4 498 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Klk1b3P00756 261 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 CiartQ3TQ03 375 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Trav8d-1Q5R1H8 112 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Chchd1Q9CQA6 118 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 PtcraP0C6B2 199 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Rps4xP62702 263 aaKnown RBP9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Klk15Q8CGR4 254 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Dok5Q91ZM9 306 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Leprotl1Q9CQ74 131 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Defa37K9J724 93 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Prss12O08762 761 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Defa5P28312 93 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Ubald2Q8BQH4 164 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Gm9242J3QNY1 357 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Vdac1Q60932 296 aaKnown RBP9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Nus1Q99LJ8 297 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Igkv12-38A0A0G2JEI7 115 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Rpl27aP14115 148 aaKnown RBP9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr1181Q7TR18 311 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr553Q7TRS6 326 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Prodh2Q8VCZ9 456 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Ufc1Q9CR09 167 aa9.03□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Dnajc13D4AFX7 2248 aaKnown RBP9.02□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Olfr918E9PVZ7 325 aa9.02□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Mrgprb2Q3KNA1 338 aa9.02□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Gatad1Q920S3 266 aa9.02□□□□□ -0.96
Scn8a-201ENSMUST00000082209 Trav6n-7A0A075B6A6 116 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr1104A2AVB5 310 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Ifi27Q8C6G0 260 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Rasl11bQ922H7 247 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 MyadmO35682 320 aaKnown RBP9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Rnd3P61588 244 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Wnt10aP70701 417 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Igfbp7Q61581 281 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Psg17Q62056 475 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Duxbl2Q7TNE6 350 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 SergefQ80YD6 464 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Cox19Q8K0C8 92 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 1700034E13RikQ9D2T6 108 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Gpa33Q9JKA5 319 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr1191-ps1A0A1L1STD5 311 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Rnf151Q9CQ29 239 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Tmem196V9GX04 182 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 H2-M5A7VMS3 348 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Ifna11Q61716 190 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Sh3bgrl2Q8BG73 107 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Ccdc188F6WEU2 249 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr275Q7TS18 319 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Asphd2Q80VP9 343 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Spsb4Q8R5B6 273 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Tmem126aQ9D8Y1 196 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Ldlrad3A2AR95 345 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 A630076J17RikJ3QQ32 107 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Ccl1P10146 92 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Lrp11Q8CB67 483 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 PaxxQ8K0Y7 205 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr577Q8VH11 312 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Smim8Q9CQQ0 97 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Vmn1r46Q9EQ45 309 aa9.02□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Defa30E9QPZ2 93 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Gm9772F6XPD8 135 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Cyb561d1A2AE42 229 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Gm21900J3QP38 180 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 OtpO09113 325 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Hoxb3P09026 433 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Zfp954Q7TNU5 416 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Psg22Q810J1 475 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Znf641Q8BZ34 422 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr123Q8VFQ1 309 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Dynlrb2Q9DAJ5 96 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Sf3b6P59708 125 aaKnown RBP9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr983Q8VG90 315 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Cep290Q6A078 2472 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Wfdc6aQ3UW55 136 aa9.01□□□□□ -0.97
Scn8a-201ENSMUST00000082209 Olfr175-ps1A0A140T8K4 308 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms