RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ifna16Q810G1 189 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lrrc20Q8CI70 184 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr523Q8VFE7 317 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr46Q8VGJ4 318 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ppp1r14aQ91VC7 147 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr632Q9EPN9 317 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cd5lQ9QWK4 352 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ncoa6Q9JL19 2067 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Abca2P41234 2434 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Qrich2A0A140LIY9 2337 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm43191F6YIH5 235 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 G530012D18RikJ3QK25 139 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ier2P17950 221 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Meox1P32442 253 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 AmelxP63277 210 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tmem71Q149F5 287 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cd200r1lQ6XJV6 249 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rab39bQ8BHC1 213 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Q8C4X7 151 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1457Q8VFK3 317 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Parm1Q923D3 296 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zfp869Q9DC47 529 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zdhhc16Q9ESG8 361 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Eif3gQ9Z1D1 320 aaKnown RBP7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv1-31A0A0A6YWK5 117 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr465-ps1A0A0U1RPZ4 315 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 H2-M5A7VMS3 348 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hbb-bh2B2RVB7 147 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ly6g6fB2RXM6 300 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1053L7MU59 313 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 P01881 257 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pet117P0DJF2 80 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Slc25a4P48962 298 aaKnown RBP7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccl21aP84444 133 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccl21bP86792 133 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccl21cP86793 133 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 SlpiP97430 131 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Col8a1Q00780 744 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 EcscrQ3TZW0 214 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 A3galt2Q3V1N9 370 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Taar5Q5QD14 337 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sap30lQ5SQF8 182 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccdc36Q6PDM4 574 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr987Q7TRA2 309 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr907Q7TRC7 310 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 ClmQ7TSN2 230 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lrtm2Q8BGX3 370 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ankrd33Q8BXP5 385 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 F930015N05RikQ8C3A3 210 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rnf182Q8C432 247 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 CenpxQ8C4X1 78 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm9837Q8C607 126 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Dctn4Q8CBY8 467 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pla2g16Q8R3U1 162 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr136Q8VG72 312 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Slc22a26Q91WJ2 552 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ms4a3Q920C4 213 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zcchc10Q9CX48 178 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hint2Q9D0S9 163 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cox20Q9D7J4 117 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ube2j1Q9JJZ4 318 aa7.1□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm14403A2BFU4 402 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm5093E9PZB3 174 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 P01882 290 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hoxa3P02831 443 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Defa-rs1P17533 116 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tpsb2P21845 276 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 VhlP40338 181 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Dlx6P70397 175 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zfp386Q1WWJ5 626 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1474Q7TQQ8 314 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fam168aQ8BGZ2 244 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tmem33Q9CR67 247 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sval1Q9D2X6 151 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Slc25a10Q9QZD8 287 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Timm9Q9WV98 89 aaKnown RBP7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tusc2Q9WVF8 110 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 SnapinQ9Z266 136 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccpg1osV9GXK1 122 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Prrc2cQ3TLH4 2846 aaKnown RBP7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mmp27D3YV89 551 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Spint5J3KMK8 105 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm15292L7N231 93 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Defa26Q3L180 93 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mettl4Q3U034 471 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lclat1Q3UN02 376 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 NotoQ5TIS6 240 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1225Q7TR01 311 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ifna13Q80SU4 189 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 C730034F03RikQ8BGL5 111 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr638Q8VH20 321 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cldn23Q9D7D7 296 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 IcaQ9DBD0 700 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hsd17b11Q9EQ06 298 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ndufaf3Q9JKL4 185 aa7.09□□□□□ -1.27
Trim39-201ENSMUST00000042717 Igkv4-51A0N8I8 119 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm10666K7N6B8 321 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r114L7N226 321 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r126L7N2C8 321 aa7.09□□□□□ -1.28
Trim39-201ENSMUST00000042717 EndogO08600 294 aa7.09□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms