RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm20825J3QM67 227 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Cxcl10P17515 98 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ppp1cbP62141 327 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Vamp3P63024 103 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Tubg1P83887 451 aaKnown RBP14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ssty2Q149W4 227 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Zfp386Q1WWJ5 626 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm21394Q497R7 227 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Trp53rkaQ5U452 244 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm20854Q62461 227 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Glrx2Q923X4 156 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Higd1bQ99JY6 98 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ms4a6cQ99N08 217 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Tp53rkQ99PW4 244 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Egr4Q9WUF2 478 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Plce1Q8K4S1 2282 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 A0A286YCQ8 80 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Trav12d-1A0N8R0 115 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Esp6A8R0U0 136 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Esp8F7AMQ8 149 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Tcn2O88968 430 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 G6pcP35576 357 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Tmem40Q4FJU9 225 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Tra2aQ6PFR5 281 aaKnown RBP14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm5148Q8BGG2 154 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ino80cQ8BHA0 191 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Klhdc3Q8VEM9 382 aa14.12□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr1320A2AHM8 319 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Mgst2A2RST1 147 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm44501A8R0T9 150 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 PpiaP17742 164 aaKnown RBP14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Rpl30P62889 115 aaKnown RBP14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Samt2Q497M0 247 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Akap9Q70FJ1 3797 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr1369-ps1A0A140T8K7 317 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Klri1B2KG20 248 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr263Q7TQT8 317 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Vgll4Q80V24 287 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Scgb3a2Q920H1 91 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Btf3l4Q9CQH7 158 aaKnown RBP14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 ChodlQ9CXM0 273 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Rnf125Q9D9R0 233 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ighv5-12A0A075B5Q4 117 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Igkv13-84A0A140T8N3 115 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Zfp334A2A4U6 679 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr1329L7MTV4 313 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 P01795 144 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Isg15Q64339 161 aaKnown RBP14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr399Q7TRX3 311 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 H2-M10.6Q85ZW5 330 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Klre1Q8CJC7 226 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Plppr2Q8VCY8 343 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr494Q8VG07 314 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr338Q8VGK6 306 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Mogat1Q91ZV4 335 aa14.11□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Atpif1O35143 106 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Smad4P97471 551 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr960Q8VET5 316 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr57Q8VGU7 319 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Mbnl1Q9JKP5 341 aaKnown RBP14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ice1E9Q286 2241 aaKnown RBP14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm28845A0A087WR76 214 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 ApooQ9DCZ4 198 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 9130204L05RikG3UWB8 92 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Ssty1P13675 232 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Wdr83osQ6ZWX0 106 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 COA4Q8BT51 87 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr167Q8VGJ5 312 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Pard6aQ9Z101 346 aa14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Igf2rQ07113 2483 aaKnown RBP14.1□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Igkv14-111A0A140T8P9 117 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Lin7cO88952 197 aaKnown RBP14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr573-ps1A0A1B0GRU2 297 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Olfr770Q8VGC2 311 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Slc35d1A2AKQ0 355 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Vmn1r224E9PWK2 298 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Hapln4Q80WM4 400 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Clec4eQ9R0Q8 214 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Sumo3Q9Z172 110 aa14.09□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Scgb1b3J3QJY4 93 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Gm5039J3QNT6 144 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 P01915 264 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 RanP62827 216 aaKnown RBP14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Wnt10aP70701 417 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Spink11Q09TK7 88 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Il31Q6EAL8 163 aa14.08□□□□□ -0.15
Ctcf-201ENSMUST00000005841 Rhox7bA6PW38 321 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Olfr872E9PVW2 323 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Vmn1r149E9PWL6 307 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Vmn1r101E9Q365 307 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Gm6460F6YJZ8 199 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Vmn1r158G3UY92 307 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 9130019O22RikG3X941 543 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Cdx2P43241 311 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Pcbd1P61458 104 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Klf14Q19A41 325 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Pef1Q8BFY6 275 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Prr15Q9D1T5 122 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Trav6n-5A0A075B621 112 aa14.08□□□□□ -0.16
Ctcf-201ENSMUST00000005841 Trav6-5A0A075B6B5 112 aa14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms