RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 PRSS46E5RG02 174 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 H3BMQ9 156 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 BOLA2-SMG1P6H3BVE0 249 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 NOL3O60936 208 aaKnown RBP5.92□□□□□ -1.46
LINC00339-212ENST00000642072 DUSP14O95147 198 aaKnown RBP5.92□□□□□ -1.46
LINC00339-212ENST00000642072 FABP1P07148 127 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 GALR1P47211 349 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 TAS2R60P59551 318 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 VBP1P61758 197 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 ESRGQ1W209 222 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 IGFL4Q6B9Z1 124 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM182Q6ZP80 229 aaPredicted RBP5.92□□□□□ -1.46
LINC00339-212ENST00000642072 RNF182Q8N6D2 247 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 OR4D5Q8NGN0 318 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 RNASE8Q8TDE3 154 aaKnown RBP5.92□□□□□ -1.46
LINC00339-212ENST00000642072 RAB2BQ8WUD1 216 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 SLC35E1Q96K37 410 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 UHRF2Q96PU4 802 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 C14orf166Q9Y224 244 aaKnown RBP5.92□□□□□ -1.46
LINC00339-212ENST00000642072 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 TRAV26-1A0A087WT03 109 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 A0A0B4J2A0 478 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 GABARAPH6UMI1 98 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 PITX3O75364 302 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 GABARAPO95166 117 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 HOXA5P20719 270 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 CCR6P51684 374 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 CLINT1Q14677 625 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 SMCO1Q147U7 214 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 LYZL2Q7Z4W2 148 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM256Q8N2U0 113 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 OR1B1Q8NGR6 318 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 RXFP4Q8TDU9 374 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 C16orf74Q96GX8 76 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 FUNDC2Q9BWH2 189 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 SLC25A39Q9BZJ4 359 aaPredicted RBP5.91□□□□□ -1.46
LINC00339-212ENST00000642072 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 EXTL2Q9UBQ6 330 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 SHPKQ9UHJ6 478 aa5.91□□□□□ -1.46
LINC00339-212ENST00000642072 MRPS16Q9Y3D3 137 aaKnown RBP5.91□□□□□ -1.46
LINC00339-212ENST00000642072 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
LINC00339-212ENST00000642072 FAM25AB3EWG3 89 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 FAM25CB3EWG5 89 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 FAM25GB3EWG6 89 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 H3BNG1 76 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 CFDP00746 253 aaPredicted RBP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 M6PRP20645 277 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 FUSP35637 526 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 LINC00315P59091 139 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 DLK1P80370 383 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 SSBP1Q04837 148 aaKnown RBP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 Q5VSD8 79 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 ZNF493Q6ZR52 646 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 OR8A1Q8NGG7 326 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM263Q8WUH6 116 aaKnown RBP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 GNPNAT1Q96EK6 184 aaPredicted RBP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 GPR82Q96P67 336 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 LINC01587Q99440 93 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 MIXL1Q9H2W2 232 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 NOP10Q9NPE3 64 aaKnown RBP5.9□□□□□ -1.46
LINC00339-212ENST00000642072 ZNF586Q9NXT0 402 aa5.9□□□□□ -1.46
LINC00339-212ENST00000642072 A0A1B0GVG6 124 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 CXCL3P19876 107 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 GATA2P23769 480 aaPredicted RBP5.89□□□□□ -1.47
LINC00339-212ENST00000642072 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 CTF1Q16619 201 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 GGNBP1Q5YKI7 109 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 Q6ZNX1 250 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 TMEM144Q7Z5S9 345 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 SMIM4Q8WVI0 70 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 PGPEP1Q9NXJ5 209 aa5.89□□□□□ -1.47
LINC00339-212ENST00000642072 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
LINC00339-212ENST00000642072 A0A0J9YY99 117 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 DISC1C4P0D8 188 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 H3BRN7 92 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 ZNF182P17025 639 aaPredicted RBP5.88□□□□□ -1.47
LINC00339-212ENST00000642072 ORM2P19652 201 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 MRPS10P82664 201 aaKnown RBP5.88□□□□□ -1.47
LINC00339-212ENST00000642072 HIST1H1AQ02539 215 aaPredicted RBP5.88□□□□□ -1.47
LINC00339-212ENST00000642072 OR5I1Q13606 314 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 CDPF1Q6NVV7 123 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 MZT2AQ6P582 158 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 ZNF738Q8NE65 137 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 OR51S1Q8NGJ8 323 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 OR10J6PQ8NGY7 276 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 AP3S1Q92572 193 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 VSIG2Q96IQ7 327 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 PRRT1Q99946 306 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
LINC00339-212ENST00000642072 NAA50Q9GZZ1 169 aaKnown RBP5.88□□□□□ -1.47
LINC00339-212ENST00000642072 A0A087X0K7 114 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 A0A096LPF7 62 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 H7BYZ3 331 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 MRPS12O15235 138 aaKnown RBP5.87□□□□□ -1.47
LINC00339-212ENST00000642072 AKAIN1P0CW23 69 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 PRB4P10163 310 aaPredicted RBP5.87□□□□□ -1.47
LINC00339-212ENST00000642072 IAPPP10997 89 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 HTN1P15515 57 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms