RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 NDUFS8O00217 210 aa13.96□□□□□ -0.17
PHGDH-226ENST00000641756 GOLT1AQ6ZVE7 132 aa13.96□□□□□ -0.17
PHGDH-226ENST00000641756 CMTM2Q8TAZ6 248 aa13.96□□□□□ -0.17
PHGDH-226ENST00000641756 SPG11Q96JI7 2443 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 IGHV3-35A0A0C4DH35 117 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.18
PHGDH-226ENST00000641756 LTAP01374 205 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 CTSGP08311 255 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 LINC00322Q6ZN03 302 aaPredicted RBP13.96□□□□□ -0.18
PHGDH-226ENST00000641756 C5orf56Q8N8D9 126 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 MBD6Q96DN6 1003 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 SPOCK3Q9BQ16 436 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 GSN-AS1Q9NRJ2 163 aa13.96□□□□□ -0.18
PHGDH-226ENST00000641756 SOX21Q9Y651 276 aaPredicted RBP13.96□□□□□ -0.18
PHGDH-226ENST00000641756 IGHV3OR16-8A0A075B7F1 116 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 IGHV4-38-2P0DP08 117 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 C15orf32Q32M92 178 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-226ENST00000641756 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 MLST8Q9BVC4 326 aa13.95□□□□□ -0.18
PHGDH-226ENST00000641756 RAB4BP61018 213 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 RHOGP84095 191 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 GNB1LQ9BYB4 327 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 NAT8BQ9UHF3 227 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 UTP20O75691 2785 aaKnown RBP13.94□□□□□ -0.18
PHGDH-226ENST00000641756 IZUMO1RA6ND01 250 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 GPR183P32249 361 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 ZFYVE26Q68DK2 2539 aa13.94□□□□□ -0.18
PHGDH-226ENST00000641756 NUPR1O60356 82 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 TMEM136Q6ZRR5 245 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 PRNTQ86SH4 94 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 Q86TA4 180 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 PIFOQ8TCI5 191 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 SMIM12Q96EX1 92 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 MS4A10Q96PG2 267 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 ASCL2Q99929 193 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 TRBV9A0A0B4J1U6 114 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 IGLV2-11P01706 119 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 S100A12P80511 92 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 RPL19P84098 196 aaKnown RBP13.93□□□□□ -0.18
PHGDH-226ENST00000641756 ZNF502Q8TBZ5 544 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 RNF24Q9Y225 148 aa13.93□□□□□ -0.18
PHGDH-226ENST00000641756 AMY1AP04745 511 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 KIAA1644Q3SXP7 199 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 CIARTQ8N365 385 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-226ENST00000641756 GBGT1Q8N5D6 347 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 NUP35Q8NFH5 326 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 TXN2Q99757 166 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 MOB4Q9Y3A3 225 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 CELSR1Q9NYQ6 3014 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 MYO18BQ8IUG5 2567 aa13.92□□□□□ -0.18
PHGDH-226ENST00000641756 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 CRISP2P16562 243 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 WDR73Q6P4I2 378 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 S100A7AQ86SG5 101 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 NEU1Q99519 415 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 LINC00527Q9UJ94 153 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 TP53TG3Q9ULZ0 132 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 M0R3E3 92 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 CLEC3BP05452 202 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 TSKUQ8WUA8 353 aa13.91□□□□□ -0.18
PHGDH-226ENST00000641756 MSMBP08118 114 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 LY6EQ16553 131 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 TMEM18Q96B42 140 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 GNB4Q9HAV0 340 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 RABAC1Q9UI14 185 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 HIGD1CA8MV81 97 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 F2Z2F3 143 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 MT-ND6P03923 174 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 LYPD1Q8N2G4 141 aa13.9□□□□□ -0.18
PHGDH-226ENST00000641756 RPP21Q9H633 154 aaKnown RBP13.9□□□□□ -0.18
PHGDH-226ENST00000641756 ZNF331Q9NQX6 463 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-226ENST00000641756 CRYBG3Q68DQ2 2970 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 A1L4Q6 167 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 C19orf71A6NCJ1 209 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 P01737 135 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 CLEC19AQ6UXS0 136 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 TCF24Q7RTU0 167 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 CCDC140Q96MF4 163 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 ZNF462Q96JM2 2506 aa13.89□□□□□ -0.19
PHGDH-226ENST00000641756 ZNF843Q8N446 348 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 DAZAP1Q96EP5 407 aaKnown RBP13.88□□□□□ -0.19
PHGDH-226ENST00000641756 PRSS22Q9GZN4 317 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 MEGF9Q9H1U4 602 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 ZNF492Q9P255 531 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 LINC00587B1AMM8 73 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 DIRC3C9JPN6 131 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 LINC00310P59036 64 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 SRSF1Q07955 248 aaKnown RBP eCLIP13.88□□□□□ -0.192e-10■■■□□ 18.2
PHGDH-226ENST00000641756 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 COX19Q49B96 90 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 TOMM20LQ6UXN7 152 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 TMEM75Q8N9X5 138 aa13.88□□□□□ -0.19
PHGDH-226ENST00000641756 NOL4LQ96MY1 436 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-226ENST00000641756 HIF1ANQ9NWT6 349 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms