RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TRAV30A0A087WSZ9 112 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 HELTA6NFD8 242 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 IGKV1-17P01599 117 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 TRGC2P03986 189 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 CRYBB3P26998 211 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 CRIP2P52943 208 aaPredicted RBP8□□□□□ -1.13
PHGDH-224ENST00000641711 PROK1P58294 105 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
PHGDH-224ENST00000641711 TAS2R60P59551 318 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
PHGDH-224ENST00000641711 SRSF2Q01130 221 aaKnown RBP8□□□□□ -1.13
PHGDH-224ENST00000641711 ASPHD1Q5U4P2 390 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 C12orf54Q6X4T0 127 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 OR1B1Q8NGR6 318 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 ELOVL1Q9BW60 279 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 TMEM14CQ9P0S9 112 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 RNF114Q9Y508 228 aa8□□□□□ -1.13
PHGDH-224ENST00000641711 PPP5D1E7EU14 171 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 K7EN84 100 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BKO60814 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 TOMM40O96008 361 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 S100A8P05109 93 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BJP06899 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 PYYP10082 97 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 PSG1P11464 419 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 ORM2P19652 201 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HOXA5P20719 270 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BOP23527 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BBP33778 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 GNG4P50150 75 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BDP58876 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BCP62807 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 NDPQ00604 133 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST2H2BEQ16778 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 CENPWQ5EE01 88 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-224ENST00000641711 ZNF329Q86UD4 541 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BHQ93079 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 IGF2BP2-AS1Q96M15 143 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 FANCD2OSQ96PS1 177 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BNQ99877 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H2BMQ99879 126 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 SERTAD4Q9NUC0 356 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 MRPL27Q9P0M9 148 aaKnown RBP7.99□□□□□ -1.13
PHGDH-224ENST00000641711 HIGD1AQ9Y241 93 aa7.99□□□□□ -1.13
PHGDH-224ENST00000641711 IGHV3-21A0A0B4J1V1 117 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 IGHV7-81A0A0B4J1V7 117 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 PGPEP1LA6NFU8 196 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 GCGP01275 180 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 IGF1P05019 195 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 EGR2P11161 476 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-224ENST00000641711 GP9P14770 177 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 FCGR2BP31994 310 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-224ENST00000641711 AKR1D1P51857 326 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-224ENST00000641711 BLCAPP62952 87 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 TIGITQ495A1 244 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 NECAP1Q8NC96 275 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 OR5T1Q8NG75 326 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 FRZBQ92765 325 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 ZNF747Q9BV97 191 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 OSTCQ9NRP0 149 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 AURKAIP1Q9NWT8 199 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-224ENST00000641711 THYN1Q9P016 225 aa7.98□□□□□ -1.13
PHGDH-224ENST00000641711 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 A0A1W2PPQ1 181 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 PEX7O00628 323 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 ISLRO14498 428 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 IGLV2-8P01709 118 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 S100A9P06702 114 aaKnown RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 NBEAP1P0C6P0 100 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 TRGC1P0CF51 173 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 CDX1P47902 265 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 MFAP4P55083 255 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SLC35B1P78383 322 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SGMS2Q8NHU3 365 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 WIPF2Q8TF74 440 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SMIM12Q96EX1 92 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 MDFIQ99750 246 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 TXN2Q99757 166 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 FAM103A1Q9BTL3 118 aaKnown RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-224ENST00000641711 IL36BQ9NZH7 164 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
PHGDH-224ENST00000641711 WI2-2373I1.2A0A1W2PRP0 233 aa7.96□□□□□ -1.14
PHGDH-224ENST00000641711 ZNF98A6NK75 572 aa7.96□□□□□ -1.14
PHGDH-224ENST00000641711 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-224ENST00000641711 H3BRN7 92 aa7.96□□□□□ -1.14
PHGDH-224ENST00000641711 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.14
PHGDH-224ENST00000641711 CNN1P51911 297 aaKnown RBP7.96□□□□□ -1.14
PHGDH-224ENST00000641711 NDUFA6P56556 154 aa7.96□□□□□ -1.14
PHGDH-224ENST00000641711 LYZP61626 148 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms