RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 Q8WTZ3 238 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 ZNF503Q96F45 646 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 FAM167A-AS1Q96KT0 104 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 GAR1Q9NY12 217 aaKnown RBP9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 S4R3C0 116 aa9.17□□□□□ -0.94
ERGIC3-220ENST00000640748 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 H3BQ15 152 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 H3BUA1 57 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 AP4M1O00189 453 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 PF4P02776 101 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 ATP5G3P48201 142 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 C15orf32Q32M92 178 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 MORN5Q5VZ52 161 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 TVP23CQ96ET8 276 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 UHRF2Q96PU4 802 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
ERGIC3-220ENST00000640748 TRBV7-1A0A0A6YYK4 115 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 FAM223BA6NKX1 122 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 BRI3O95415 125 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 RHEBQ15382 184 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 FAM223AQ8IWN6 122 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 RNF125Q96EQ8 232 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 MS4A10Q96PG2 267 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 MRPL27Q9P0M9 148 aaKnown RBP9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 LINC00527Q9UJ94 153 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 ZNF580Q9UK33 172 aa9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 YTHDF2Q9Y5A9 579 aaKnown RBP9.15□□□□□ -0.94
ERGIC3-220ENST00000640748 A0A1W2PRE2 83 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 DNASE2O00115 360 aaPredicted RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 NUPL2O15504 423 aaKnown RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 OR2C1O95371 312 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 TRGV3P03979 118 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 IL4P05112 153 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 OR10J4P0C629 311 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 S100A7P31151 101 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 PNRC1Q12796 327 aaPredicted RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 KIAA0141Q14154 515 aaPredicted RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF674Q2M3X9 581 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF491Q8N8L2 437 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 RPUSD4Q96CM3 377 aaKnown RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 ATP6V0BQ99437 205 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 PARLQ9H300 379 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 NAT8Q9UHE5 227 aa9.14□□□□□ -0.95
ERGIC3-220ENST00000640748 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 H3BRN7 92 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 CTSGP08311 255 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 PYYP10082 97 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 PPIFP30405 207 aaKnown RBP9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 GPR183P32249 361 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 TMEM241Q24JQ0 296 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF329Q86UD4 541 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 WWC2-AS2Q96NR7 200 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 C20orf24Q9BUV8 137 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 RNF24Q9Y225 148 aa9.13□□□□□ -0.95
ERGIC3-220ENST00000640748 B4DEV8 164 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 CLEC3BP05452 202 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 NPPCP23582 126 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 TPPP2P59282 170 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 CLEC19AQ6UXS0 136 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 USMG5Q96IX5 58 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 NOL4LQ96MY1 436 aaPredicted RBP9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 SMCO4Q9NRQ5 59 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 TMEM14CQ9P0S9 112 aa9.12□□□□□ -0.95
ERGIC3-220ENST00000640748 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 BMPR1BO00238 502 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 TGOLN2O43493 480 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 NDUFB4O95168 129 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 GP9P14770 177 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 USF2Q15853 346 aaPredicted RBP9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 CCDC140Q96MF4 163 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 CHRDL1Q9BU40 450 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 GNB4Q9HAV0 340 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 RABAC1Q9UI14 185 aa9.11□□□□□ -0.95
ERGIC3-220ENST00000640748 A0A087WWC5 75 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms