RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CKS1BP61024 79 aa12.02□□□□□ -0.48
HNRNPU-226ENST00000640218 TMEM249Q2WGJ8 235 aa12.02□□□□□ -0.48
HNRNPU-226ENST00000640218 CYTL1Q9NRR1 136 aa12.02□□□□□ -0.48
HNRNPU-226ENST00000640218 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.48
HNRNPU-226ENST00000640218 TMEM86BQ8N661 226 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 SIGLEC9Q9Y336 463 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 NTF4P34130 210 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 KLHL30-AS1Q8NEE0 82 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 YLPM1P49750 1951 aaKnown RBP12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 CD5P06127 495 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 S100A7L2Q5SY68 101 aa12.02□□□□□ -0.49
HNRNPU-226ENST00000640218 SH2D1AO60880 128 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 LCN12Q6JVE5 192 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 OR2K2Q8NGT1 345 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 DMRTC2Q8IXT2 367 aaPredicted RBP12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 BPESC1Q9GZL8 116 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 UBE2E2Q96LR5 201 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 MEGF9Q9H1U4 602 aa12.01□□□□□ -0.49
HNRNPU-226ENST00000640218 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 PRR30Q53SZ7 412 aaPredicted RBP12□□□□□ -0.49
HNRNPU-226ENST00000640218 PHLDA1Q8WV24 401 aaPredicted RBP12□□□□□ -0.49
HNRNPU-226ENST00000640218 PI4KAP42356 2102 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 ZMAT4Q9H898 229 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 LINC00587B1AMM8 73 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 E9PQ18 207 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 HIST1H2BLQ99880 126 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 Q6ZS92 163 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 GLRX5Q86SX6 157 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 FANCMQ8IYD8 2048 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 LINC01551Q86U37 167 aa12□□□□□ -0.49
HNRNPU-226ENST00000640218 SPTBN1Q01082 2364 aaKnown RBP12□□□□□ -0.49
HNRNPU-226ENST00000640218 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 NDUFAF3Q9BU61 184 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 SLC25A2Q9BXI2 301 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 A0A1B0GV72 72 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 EP300Q09472 2414 aaPredicted RBP11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 M0R2P5 195 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 PSG3Q16557 428 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 USMG5Q96IX5 58 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 SAA4P35542 130 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
HNRNPU-226ENST00000640218 E7EQL1 145 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 TRAV8-1A0A0A6YYK1 113 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 UBE2CO00762 179 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 IGHG3P01860 377 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 MLANAQ16655 118 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 LSM4Q9Y4Z0 139 aaKnown RBP11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 TRBV6-6A0A0A6YYG2 114 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 EREGO14944 169 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 LINC01356Q8N9X3 169 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 DOPEY2Q9Y3R5 2298 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 QRFPP83859 136 aa11.98□□□□□ -0.49
HNRNPU-226ENST00000640218 TRBV24-1A0A075B6N3 115 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 TOMM40O96008 361 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 ERG28Q9UKR5 140 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 C14orf178Q8N769 122 aaPredicted RBP11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 JPT2Q9H910 190 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 C15orf62A8K5M9 175 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
HNRNPU-226ENST00000640218 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 LHBP01229 141 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 SMPXQ9UHP9 88 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 ZNRD1Q9P1U0 126 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 ZNF479Q96JC4 524 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 CSTL1Q9H114 145 aa11.96□□□□□ -0.49
HNRNPU-226ENST00000640218 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 A0A0G2JRQ6 117 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 PAX4O43316 350 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 AMBPP02760 352 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 HSD52Q0P140 79 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 RNF114Q9Y508 228 aa11.96□□□□□ -0.5
HNRNPU-226ENST00000640218 ERCC8Q13216 396 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 A0A1B0GW64 132 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 COLCA2A8K830 154 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 TMEM238C9JI98 176 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 VCYO14598 125 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 MS4A6AQ9H2W1 248 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms