RNA–Protein interactions for RNA: ENST00000639913.1

KCNMA1-273, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 12,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-273ENST00000639913 MS4A6AQ9H2W1 248 aa7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 ARFGEF3Q5TH69 2177 aa7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 ESDP10768 282 aa7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 LRRK1Q38SD2 2015 aa7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 PSME4Q14997 1843 aa7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
KCNMA1-273ENST00000639913 LINC00158P58513 81 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 ACACAQ13085 2346 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 IGKV1-39P01597 117 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 IGKV1D-39P04432 117 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 SHANK1Q9Y566 2161 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 ERVK11-1P61568 191 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 HAPLN4Q86UW8 402 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 PDCD11Q14690 1871 aaKnown RBP7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 SLC25A48Q6ZT89 311 aaKnown RBP7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 SLC50A1Q9BRV3 221 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 K7ERJ3 54 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 H0YJW9 148 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 COPS9Q8WXC6 57 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 COL4A6Q14031 1691 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 IL18BPO95998 194 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 RNF182Q8N6D2 247 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
KCNMA1-273ENST00000639913 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 OR9G4Q8NGQ1 327 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 PHF3Q92576 2039 aaKnown RBP7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 ZFP36L1Q07352 338 aaKnown RBP7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 FANCMQ8IYD8 2048 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 TMEM167AQ8TBQ9 72 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 PATJQ8NI35 1801 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 UNQ6494/PRO21346Q6UXR6 183 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 RNASE6Q93091 150 aaKnown RBP7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 TRGV9Q99603 122 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 COX11Q9Y6N1 276 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 VMO1Q7Z5L0 202 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 YAE1D1Q9NRH1 226 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 SLC25A15Q9Y619 301 aa7.04□□□□□ -1.28
KCNMA1-273ENST00000639913 M0R2P5 195 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 IGHV1-8P0DP01 117 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 PAX9P55771 341 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 ZFAND6Q6FIF0 208 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 TRAV26-2A0A0B4J265 109 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 TRAV41A0A0B4J266 112 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 PF4P02776 101 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 GAGE2EQ4V326 116 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 GAGE2DQ9UEU5 116 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 PPBPP02775 128 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 FAM168AQ92567 244 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 PAX8Q06710 450 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 SLC25A2Q9BXI2 301 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 FCN3O75636 299 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 C1orf147Q96MC9 270 aaPredicted RBP7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 KNCNA6PVL3 124 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 UCNP55089 124 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 RPRMLQ8N4K4 120 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
KCNMA1-273ENST00000639913 IGKV1-16P04430 117 aa7.02□□□□□ -1.28
KCNMA1-273ENST00000639913 ZNF688P0C7X2 276 aa7.02□□□□□ -1.28
KCNMA1-273ENST00000639913 ZNF876PQ49A33 203 aa7.02□□□□□ -1.28
KCNMA1-273ENST00000639913 SRRM4A7MD48 611 aaKnown RBP7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 COL8A2P25067 703 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 CSRP2Q16527 193 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 ATXN8Q156A1 80 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 TOMM40O96008 361 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 SPINK8P0C7L1 97 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 GBF1Q92538 1859 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 VWC2Q2TAL6 325 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 A0A1B0GWJ7 208 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 SLAQ13239 276 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 TMEM8BA6NDV4 472 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 TRGV4A0A0C4DH28 118 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 NDUFS8O00217 210 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 MRPS18CQ9Y3D5 142 aaKnown RBP7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 SPRY2O43597 315 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
KCNMA1-273ENST00000639913 SRSF7Q16629 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
KCNMA1-273ENST00000639913 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms