RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 GPR82Q96P67 336 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 APCP25054 2843 aa11.86□□□□□ -0.51
TRIM3-215ENST00000639856 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
TRIM3-215ENST00000639856 CA1P00915 261 aaPredicted RBP11.85□□□□□ -0.51
TRIM3-215ENST00000639856 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 ZNF491Q8N8L2 437 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 FMC1Q96HJ9 113 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
TRIM3-215ENST00000639856 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 IZUMO1RA6ND01 250 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 NUPR1O60356 82 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 TCRAP04437 139 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 DSCR9P59020 149 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 TMEM136Q6ZRR5 245 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 MLST8Q9BVC4 326 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 H3BRN7 92 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 GNG7O60262 68 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 AMY1AP04745 511 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 PRR27Q6MZM9 219 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 RNF125Q96EQ8 232 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 ZNF48Q96MX3 618 aaPredicted RBP11.84□□□□□ -0.51
TRIM3-215ENST00000639856 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
TRIM3-215ENST00000639856 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
TRIM3-215ENST00000639856 A0A096LNT2 108 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 IL4P05112 153 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 PLA2G2AP14555 144 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 MFAP4P55083 255 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 MRPL54Q6P161 138 aaKnown RBP11.83□□□□□ -0.52
TRIM3-215ENST00000639856 BPIFA4PQ86YQ2 179 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 Q8N9W7 124 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 MAPK1IP1LQ8NDC0 245 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 WI2-2373I1.2A0A1W2PRP0 233 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 LTAP01374 205 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 HLA-DQA1P01909 254 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 BRS3P32247 399 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 Q0VG73 95 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 HIF1ANQ9NWT6 349 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 S4R3C0 116 aa11.83□□□□□ -0.52
TRIM3-215ENST00000639856 B4DSR2 109 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 ESDP10768 282 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 SLC25A16P16260 332 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
TRIM3-215ENST00000639856 HIST2H2BCQ6DN03 193 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 THYN1Q9P016 225 aa11.82□□□□□ -0.52
TRIM3-215ENST00000639856 IGHV7-81A0A0B4J1V7 117 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 F8W735 103 aaPredicted RBP11.81□□□□□ -0.52
TRIM3-215ENST00000639856 AVPP01185 164 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 LINC00310P59036 64 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 RAB4BP61018 213 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 RASL11AQ6T310 242 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 OR4F17Q8NGA8 305 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 TSKUQ8WUA8 353 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 HSPB9Q9BQS6 159 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 NBPF19A0A087WUL8 3843 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 IGLC2P0DOY2 106 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 EGR2P11161 476 aaPredicted RBP11.81□□□□□ -0.52
TRIM3-215ENST00000639856 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 WIPF2Q8TF74 440 aaPredicted RBP11.81□□□□□ -0.52
TRIM3-215ENST00000639856 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 ZNF331Q9NQX6 463 aaPredicted RBP11.81□□□□□ -0.52
TRIM3-215ENST00000639856 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
TRIM3-215ENST00000639856 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
TRIM3-215ENST00000639856 PKIAP61925 76 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 S100A7AQ86SG5 101 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 SERF1AO75920 110 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 HLA-DRB1P01911 266 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 Q56UQ5 140 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 LINC00322Q6ZN03 302 aaPredicted RBP11.8□□□□□ -0.52
TRIM3-215ENST00000639856 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 NEU1Q99519 415 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 PRSS22Q9GZN4 317 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 ZNF492Q9P255 531 aa11.8□□□□□ -0.52
TRIM3-215ENST00000639856 C19orf71A6NCJ1 209 aa11.79□□□□□ -0.52
TRIM3-215ENST00000639856 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
TRIM3-215ENST00000639856 TSTD3H0UI37 97 aa11.79□□□□□ -0.52
TRIM3-215ENST00000639856 J3QKU1 62 aa11.79□□□□□ -0.52
TRIM3-215ENST00000639856 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
TRIM3-215ENST00000639856 NDUFB8O95169 186 aa11.79□□□□□ -0.52
TRIM3-215ENST00000639856 FCGR2BP31994 310 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 437.2 ms