RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 OCC1Q8TAD7 63 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 SBF1O95248 1867 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 LINC01619G3V211 115 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 TOMM40O96008 361 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 LINC00158P58513 81 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 KLHDC3Q9BQ90 382 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 REG4Q9BYZ8 158 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 TCF20Q9UGU0 1960 aaKnown RBP8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 LINC00614P0C842 121 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 TDGF1P3P51864 188 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 H0YIZ8 118 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 DDTP30046 118 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 RIPPLY3P57055 190 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 SUPT4H1P63272 117 aaKnown RBP8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 NMSQ5H8A3 153 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 TMEM14EPQ6UXP3 125 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 EXOC3-AS1Q8N2X6 119 aa8.36□□□□□ -1.07
KCNQ3-208ENST00000639496 VCYO14598 125 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 LDLRAD4O15165 306 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 IGKV1-5P01602 117 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 IGHV3-53P01767 116 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 RPRMLQ8N4K4 120 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 NCOR1P1Q9H4R4 102 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 CFHR2P36980 270 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 RUSC1-AS1Q66K80 236 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 PHF3Q92576 2039 aaKnown RBP8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 LY6G6EA0A0G2JKS1 128 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 PSG3Q16557 428 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 LY6G6FQ5SQ64 297 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 FAM19A2Q8N3H0 131 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 U3KQA8 63 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 PDCD11Q14690 1871 aaKnown RBP8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 LINC00473A8K010 186 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 NDUFB8O95169 186 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
KCNQ3-208ENST00000639496 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 RHODO00212 210 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 SMPXQ9UHP9 88 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 FNDC10F2Z333 226 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 PDE6HQ13956 83 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 MST1LQ2TV78 715 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 APOC4P55056 127 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 DAD1P61803 113 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 PHLDA1Q8WV24 401 aaPredicted RBP8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 IFI27L1Q96BM0 104 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 GFI1Q99684 422 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 CHTOPQ9Y3Y2 248 aaKnown RBP8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 ATP6V0E1O15342 81 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 RASL10AQ92737 203 aa8.34□□□□□ -1.07
KCNQ3-208ENST00000639496 TYMSP04818 313 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 C1orf159Q96HA4 380 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 AGMATQ9BSE5 352 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 EVI2AP22794 236 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 LAGE3Q14657 143 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 C14orf144Q96I85 54 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 ANKHD1Q8IWZ3 2542 aaKnown RBP8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 C5orf63A6NC05 138 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 TSPAN13O95857 204 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 LMO1P25800 156 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 FXYD7P58549 80 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 IGHV3-73A0A0B4J1V6 119 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 TRAV1-1A0A0B4J248 108 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 ELANEP08246 267 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 TMEM249Q2WGJ8 235 aa8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
KCNQ3-208ENST00000639496 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 EREGO14944 169 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 ERCC8Q13216 396 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 SS18Q15532 418 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 F5H768 121 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 FGF16O43320 207 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 SNAI2O43623 268 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 SERF1AO75920 110 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 IGKV1-16P04430 117 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 BTCP35070 178 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 MGST2Q99735 147 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 PAX4O43316 350 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 YPEL3P61236 119 aaPredicted RBP8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 PAX2Q02962 417 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 LHFPL4Q7Z7J7 247 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 C10orf126Q8N4M7 172 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 TMEM170AQ8WVE7 144 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 SLC25A2Q9BXI2 301 aa8.32□□□□□ -1.08
KCNQ3-208ENST00000639496 ZMAT4Q9H898 229 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms