RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 TRBV5-3A0A0A0MS03 114 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 SLAQ13239 276 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 LCN12Q6JVE5 192 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 CARD19Q96LW7 228 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 FGF6P10767 208 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 CRYBA4P53673 196 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 SMRP1Q8NCR6 262 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 ZNF319Q9P2F9 582 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 CENPVL1A0A0U1RR11 272 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 REPIN1Q9BWE0 567 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 F8VVB4 439 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 F8VWA3 439 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 PRB2P02812 416 aaPredicted RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 PEBP1P30086 187 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 ZNF138P52744 262 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 TNRC6CQ9HCJ0 1690 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 TRBV24-1A0A075B6N3 115 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 CELA2AP08217 269 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 A0A1W2PR77 199 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 TAL2Q16559 108 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 SPSB2Q99619 263 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 RALGAPA2Q2PPJ7 1873 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 LINC01560Q8TB33 94 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 F6UB75 175 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 SH2D1AO60880 128 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 SMIM2Q9BVW6 85 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 C15orf32Q32M92 178 aa10.87□□□□□ -0.67
UBE3A-228ENST00000638155 CD55P08174 381 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 FBLIM1Q8WUP2 373 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 MPZP25189 248 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 COL22A1Q8NFW1 1626 aaPredicted RBP10.86□□□□□ -0.67
UBE3A-228ENST00000638155 PMS2P5A8MQ11 134 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 PFN2P35080 140 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
UBE3A-228ENST00000638155 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
UBE3A-228ENST00000638155 BRK1Q8WUW1 75 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 LINC00477Q96M19 166 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 TINCRA0A1B0GVN0 87 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 SUPT4H1P63272 117 aaKnown RBP10.86□□□□□ -0.67
UBE3A-228ENST00000638155 STPG4Q8N801 248 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 VSIRQ9H7M9 311 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 MED13Q9UHV7 2174 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 YPEL1O60688 119 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 CXCL1P09341 107 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 YPEL2Q96QA6 119 aa10.86□□□□□ -0.67
UBE3A-228ENST00000638155 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 NDUFS6O75380 124 aaKnown RBP10.85□□□□□ -0.67
UBE3A-228ENST00000638155 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
UBE3A-228ENST00000638155 K7EP34 96 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 K7EP13 123 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 CLPSP04118 112 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 GREM1O60565 184 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 KLHDC3Q9BQ90 382 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 A8MWP6 167 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 RHODO00212 210 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 FAM216BQ8N7L0 139 aa10.85□□□□□ -0.67
UBE3A-228ENST00000638155 TRAV40A0A0B4J280 105 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 LOC101059948A0A1B0GTJ6 334 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 E9PQ18 207 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 FAM166AQ6J272 317 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 A0A087WWL8 130 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 A0A0G2JK05 382 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 FOXS1O43638 330 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 HLA-DMBP28068 263 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 FAM181AQ8N9Y4 354 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 DSCR9P59020 149 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 OR11H6Q8NGC7 330 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 B5MCH6 92 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 RMI2Q96E14 147 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 NRTNQ99748 197 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 CTSBP07858 339 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 LIME1Q9H400 295 aa10.84□□□□□ -0.67
UBE3A-228ENST00000638155 TNRC6BQ9UPQ9 1833 aaKnown RBP10.84□□□□□ -0.67
UBE3A-228ENST00000638155 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 FOXL2P58012 376 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 FRMPD3Q5JV73 1810 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 RNF222A6NCQ9 220 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 A0A0A6YYD4 124 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 GZMMP51124 257 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
UBE3A-228ENST00000638155 TMEM52Q8NDY8 209 aa10.83□□□□□ -0.68
UBE3A-228ENST00000638155 NCOA6Q14686 2063 aaPredicted RBP10.82□□□□□ -0.68
UBE3A-228ENST00000638155 IGHV2OR16-5A0A0B4J2B6 119 aa10.82□□□□□ -0.68
UBE3A-228ENST00000638155 ZNF501Q96CX3 271 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms