RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 LINC01587Q99440 93 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 RPP25Q9BUL9 199 aaKnown RBP4.65□□□□□ -1.66
SCN1A-216ENST00000637968 DYSFO75923 2080 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 ZDBF2Q9HCK1 2354 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 D6R8Y8 96 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 ZIC3O60481 467 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 FCGR3BO75015 233 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 PLNP26678 52 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 PLGLAQ15195 96 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 Q6ZR03 302 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 Q8N1Y9 231 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 C8orf31Q8N9H6 132 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 FMC1Q96HJ9 113 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 CARD19Q96LW7 228 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 TTTY13Q9BZ97 58 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 JPT2Q9H910 190 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 FGF22Q9HCT0 170 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 SSUH2Q9Y2M2 353 aa4.65□□□□□ -1.66
SCN1A-216ENST00000637968 IGKV1D-43A0A0B4J1Z2 117 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 FRG2CA6NGY1 282 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 NPIPB13A6NJU9 1138 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 NPIPB4C9JG80 1138 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 IGHG4P01861 327 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 ACYP1P07311 99 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 CCL11P51671 97 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 LINC00596Q86U02 117 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 UCN2Q96RP3 112 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 IMUPQ9GZP8 106 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 NUP210LQ5VU65 1888 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 SHANK1Q9Y566 2161 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 H0Y8X5 98 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 KLK10O43240 276 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 SPINT2O43291 252 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 HLA-DMBP28068 263 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 PRNTQ86SH4 94 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 ABHD12Q8N2K0 398 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 CFHR4Q92496 578 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 S1PR3Q99500 378 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 PLA2G2FQ9BZM2 168 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 PRDM6Q9NQX0 595 aa4.65□□□□□ -1.67
SCN1A-216ENST00000637968 KIF26AQ9ULI4 1882 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-216ENST00000637968 PLXNB3Q9ULL4 1909 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 SPTY2D1-AS1A0A0U1RR47 76 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 MS4A18H0YCH9 400 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 H7C1H1 209 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 COX7CP15954 63 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 SIRPDQ9H106 197 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 GNG12Q9UBI6 72 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 ADAMTSL1Q8N6G6 1762 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 TRAV40A0A0B4J280 105 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 CRLF1O75462 422 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 TCL1BO95988 128 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 COX6A1P12074 109 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 NPC2P61916 151 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 SHISA5Q8N114 240 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 NUP37Q8NFH4 326 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 PHLDA1Q8WV24 401 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-216ENST00000637968 VKORC1Q9BQB6 163 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 ASXL3Q9C0F0 2248 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 IGHV1OR15-9A0A0B4J2B8 117 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 A0A0U1RQV1 116 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 A0A1B0GXF2 115 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 MRPL33O75394 65 aaKnown RBP4.64□□□□□ -1.67
SCN1A-216ENST00000637968 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 CNTFRP26992 372 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 PFN2P35080 140 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 PRSS12P56730 875 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 AAED1Q7RTV5 226 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 WDR31Q8NA23 367 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 NPIPB3Q92617 1050 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 TRGV9Q99603 122 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 KLK5Q9Y337 293 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-216ENST00000637968 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
SCN1A-216ENST00000637968 hADV29S1A0JD25 119 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 LILRA5A6NI73 299 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 TIMM23O14925 209 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 IGKV1-39P01597 117 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 IGKV1D-39P04432 117 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 EDN2P20800 178 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 GATA4P43694 442 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 ZNF295-AS1Q8N0V1 137 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 BAALCQ8WXS3 180 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 LYZL4Q96KX0 146 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 ZNF492Q9P255 531 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 PRO1854Q9UHT4 67 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 SSR4P51571 173 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 ZNF493Q6ZR52 646 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 IGF2BP2-AS1Q96M15 143 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 ZNF488Q96MN9 340 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 IGHV3OR15-7A0A075B7D8 119 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 A0A1W2PQD3 144 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 PLA2G5P39877 138 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 ZFP2Q6ZN57 461 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 DYNLRB1Q9NP97 96 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 GREB1Q4ZG55 1949 aa4.63□□□□□ -1.67
SCN1A-216ENST00000637968 TMEM30CPA0ZSE6 113 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms