RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 IGF2BP2-AS1Q96M15 143 aa16.78■□□□□ 0.28
CHRNA7-228ENST00000637519 DUX5Q96PT3 197 aa16.78■□□□□ 0.28
CHRNA7-228ENST00000637519 TGOLN2O43493 480 aa16.77■□□□□ 0.28
CHRNA7-228ENST00000637519 TRBV12-3P01733 135 aa16.77■□□□□ 0.28
CHRNA7-228ENST00000637519 IGLC2P0DOY2 106 aa16.77■□□□□ 0.28
CHRNA7-228ENST00000637519 GALR1P47211 349 aa16.77■□□□□ 0.28
CHRNA7-228ENST00000637519 FLNAP21333 2647 aaKnown RBP16.77■□□□□ 0.28
CHRNA7-228ENST00000637519 AP4M1O00189 453 aa16.77■□□□□ 0.27
CHRNA7-228ENST00000637519 SCGB2A1O75556 95 aa16.77■□□□□ 0.27
CHRNA7-228ENST00000637519 IGHV3-11P01762 117 aa16.77■□□□□ 0.27
CHRNA7-228ENST00000637519 ZFAND3Q9H8U3 227 aa16.77■□□□□ 0.27
CHRNA7-228ENST00000637519 TRBV7-1A0A0A6YYK4 115 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 ISLRO14498 428 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 HOXA3O43365 443 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 PF4V1P10720 104 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 FOLR2P14207 255 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 TEX38Q6PEX7 206 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 EPDR1Q9UM22 224 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 RPS10P46783 165 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 Q6YL49 198 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 C9orf139Q6ZV77 190 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 OR4F17Q8NGA8 305 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 ANAPC16Q96DE5 110 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 RABAC1Q9UI14 185 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 PRELID1Q9Y255 219 aa16.76■□□□□ 0.27
CHRNA7-228ENST00000637519 TRBV19A0A075B6N1 114 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 IGHV3-66A0A0C4DH42 116 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 FAM223BA6NKX1 122 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 ZNF207O43670 478 aaKnown RBP16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 IGLV2-8P01709 118 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 C10orf99Q6UWK7 81 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 FAM223AQ8IWN6 122 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 VPREB3Q9UKI3 123 aa16.75■□□□□ 0.27
CHRNA7-228ENST00000637519 IGHV3OR16-13A0A075B7E8 117 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 IGHV3-74A0A0B4J1X5 117 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 PFN1P07737 140 aaKnown RBP16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 CNN1P51911 297 aaKnown RBP16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 HECTD1Q9ULT8 2610 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 AKAP9Q99996 3911 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 IGHV3-49A0A0A0MS15 119 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 BMPR1BO00238 502 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 MGST1P10620 155 aaKnown RBP16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 CDC42EP3Q9UKI2 254 aa16.74■□□□□ 0.27
CHRNA7-228ENST00000637519 CLPSL1A2RUU4 121 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 FAM3BP58499 235 aaPredicted RBP16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 CFHR3Q02985 330 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 OR5R1Q8NH85 324 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 FAM210BQ96KR6 192 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 OR5B12Q96R08 314 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 RNASE7Q9H1E1 156 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 A0A1W2PPQ1 181 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 SIGLEC15Q6ZMC9 328 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 C5orf17Q8NAS9 161 aa16.73■□□□□ 0.27
CHRNA7-228ENST00000637519 C1orf196B1AJZ1 125 aa16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 APOHP02749 345 aaPredicted RBP16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 Q71RC1 249 aaPredicted RBP16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 C1QL4Q86Z23 238 aa16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 OTORQ9NRC9 128 aa16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 SONP18583 2426 aaKnown RBP16.72■□□□□ 0.27
CHRNA7-228ENST00000637519 TRAV8-1A0A0A6YYK1 113 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 TCRAP04437 139 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 CD99P14209 185 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 OR8I2Q8N0Y5 310 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 OR10G8Q8NGN5 311 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 ATG101Q9BSB4 218 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 GAR1Q9NY12 217 aaKnown RBP16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 LY96Q9Y6Y9 160 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 IGLV1-40P01703 118 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 ARL3P36405 182 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 ERVFC1-1P60608 527 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 SMAD5-AS1Q9Y6J3 95 aa16.71■□□□□ 0.27
CHRNA7-228ENST00000637519 M0R3E3 92 aa16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 UBE2G1P62253 170 aa16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 BAGE2Q86Y30 109 aa16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 SIGLECL1Q8N7X8 197 aa16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 ASCL2Q99929 193 aa16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 FASNP49327 2511 aaKnown RBP16.7■□□□□ 0.26
CHRNA7-228ENST00000637519 S100PP25815 95 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 TAS2R60P59551 318 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 FLI1Q01543 452 aaPredicted RBP16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 TRBV24-1A0A075B6N3 115 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 RAB5BP61020 215 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 TMEM183BQ1AE95 376 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 IGFL4Q6B9Z1 124 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 GOLT1AQ6ZVE7 132 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 S100A7AQ86SG5 101 aa16.69■□□□□ 0.26
CHRNA7-228ENST00000637519 H3BUA1 57 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 GCGP01275 180 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 RAB9AP51151 201 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 PRR27Q6MZM9 219 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 UNQ9165/PRO28630Q6UXU0 137 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 CMTM2Q8TAZ6 248 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 TCEAL7Q9BRU2 100 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 CUBNO60494 3623 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 TRGC2P03986 189 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 RPL7P18124 248 aaKnown RBP16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 RELQ04864 619 aaPredicted RBP16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 KRTAP1-1Q07627 177 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 V9GYV3 84 aa16.68■□□□□ 0.26
CHRNA7-228ENST00000637519 PPP1R2P9O14990 202 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms